BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000093.1_g0460.1
         (91 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAL36473.1 reverse transcriptase, partial [Setaria faberi]            139   2e-41
AAL36489.1 reverse transcriptase, partial [Setaria viridis var. ...   138   4e-41
AAL36486.1 reverse transcriptase, partial [Setaria verticillata]      136   3e-40

>AAL36473.1 reverse transcriptase, partial [Setaria faberi]
          Length = 92

 Score =  139 bits (350), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 66/82 (80%), Positives = 71/82 (86%)

Query: 1  MDVKTAFLNGKLKEDVYMTHPEGFEDSGNAGKVCKLQRSIYGLKQASRSWNLRFEEKIKE 60
          MDVKTAFLNG L EDVYM  PEGF D  NAGKVCKLQRSIYGLKQASRSWN+RF+E +K 
Sbjct: 2  MDVKTAFLNGNLAEDVYMIQPEGFVDPKNAGKVCKLQRSIYGLKQASRSWNIRFDEVVKG 61

Query: 61 FGFLKNEEESCVYKKVSGSNLV 82
          F F KNEEESCVYKKVSGS++V
Sbjct: 62 FDFTKNEEESCVYKKVSGSSVV 83


>AAL36489.1 reverse transcriptase, partial [Setaria viridis var. minor]
          Length = 92

 Score =  138 bits (348), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 66/82 (80%), Positives = 71/82 (86%)

Query: 1  MDVKTAFLNGKLKEDVYMTHPEGFEDSGNAGKVCKLQRSIYGLKQASRSWNLRFEEKIKE 60
          MDVKTAFLNGKL EDVYM  PEGF D  NAGKVCKLQRSIYGLKQASRSWN+ F+E +K 
Sbjct: 2  MDVKTAFLNGKLAEDVYMIQPEGFVDPKNAGKVCKLQRSIYGLKQASRSWNIHFDEVVKG 61

Query: 61 FGFLKNEEESCVYKKVSGSNLV 82
          F F KNEEESCVYKKVSGS++V
Sbjct: 62 FDFTKNEEESCVYKKVSGSSVV 83


>AAL36486.1 reverse transcriptase, partial [Setaria verticillata]
          Length = 92

 Score =  136 bits (343), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 71/82 (86%)

Query: 1  MDVKTAFLNGKLKEDVYMTHPEGFEDSGNAGKVCKLQRSIYGLKQASRSWNLRFEEKIKE 60
          MDVKTAFLNG L EDVYM  PEGF +  NAGKVCKLQRSIYGLKQASRSWN+RF+E +K 
Sbjct: 2  MDVKTAFLNGNLAEDVYMIQPEGFVNPKNAGKVCKLQRSIYGLKQASRSWNIRFDEVVKG 61

Query: 61 FGFLKNEEESCVYKKVSGSNLV 82
          F F KNEEESCVYKKVSGS+++
Sbjct: 62 FDFTKNEEESCVYKKVSGSSVI 83

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