BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0470.1
(181 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017613649.1 PREDICTED: uncharacterized mitochondrial protein ... 154 3e-45
ADB85429.1 putative retrotransposon protein [Phyllostachys edulis] 166 2e-44
BAA22288.1 polyprotein [Oryza australiensis] 158 1e-41
>XP_017613649.1 PREDICTED: uncharacterized mitochondrial protein AtMg00820-like
[Gossypium arboreum]
Length = 144
Score = 154 bits (390), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 95/135 (70%), Gaps = 14/135 (10%)
Query: 50 QAPRRSARLIELSQRQELLLVEDNEPNTYTEAMTSPDTEAMTSPDSEKWLGAMKSEMESM 109
AP R LI + ++LL++ +EP T D EA+ SPDSEKWL AM SEM+SM
Sbjct: 14 HAPERYGFLI--TTHGDILLIDQDEPRT--------DQEAVASPDSEKWLEAMISEMDSM 63
Query: 110 SENQVWDLVDLLDGVKPIGCKWIFKMKTDKDGNVSVFKARLVAKGYRQVQGIDY----AP 165
ENQVW LVD +GVKPIGCKW+FK KTD DGNV + RLVAKG+RQ+ G+DY +P
Sbjct: 64 YENQVWTLVDPPEGVKPIGCKWVFKKKTDMDGNVETYNGRLVAKGFRQIHGVDYDETFSP 123
Query: 166 VAMLKSIRIILAIAA 180
VAM KSIRI+LAIAA
Sbjct: 124 VAMFKSIRILLAIAA 138
>ADB85429.1 putative retrotransposon protein [Phyllostachys edulis]
Length = 1313
Score = 166 bits (419), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 113/165 (68%), Gaps = 21/165 (12%)
Query: 25 GDPPAQSECDSQENPQGVESVSPV--VQAPRRSARLIELSQR--QELLLVEDNEPNTYTE 80
G P+ S ++N V PV APRRS R ++ R ++LL+ ++EPNTY E
Sbjct: 742 GKSPSLSFLKDEQNI-----VEPVDEASAPRRSKRPCQMPIRYAHDILLLNNDEPNTYKE 796
Query: 81 AMTSPDTEAMTSPDSEKWLGAMKSEMESMSENQVWDLVDLLDGVKPIGCKWIFKMKTDKD 140
AM PD SEKWLGAMKSE++SM +NQVW+LVD LDGVK I CKWI+K K D D
Sbjct: 797 AMMDPD--------SEKWLGAMKSEIDSMRDNQVWNLVDPLDGVKTIECKWIYKKKIDMD 848
Query: 141 GNVSVFKARLVAKGYRQVQGIDY----APVAMLKSIRIILAIAAH 181
GNV + KARLVAKG+RQVQG+DY + VAMLKSIRIILAIAA+
Sbjct: 849 GNVHIHKARLVAKGFRQVQGVDYDETFSLVAMLKSIRIILAIAAY 893
>BAA22288.1 polyprotein [Oryza australiensis]
Length = 1317
Score = 158 bits (400), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 113/169 (66%), Gaps = 31/169 (18%)
Query: 36 QENPQGVESVS-----------PVVQ--APRRSAR------LIELSQRQELLLVEDNEPN 76
QE P+ V + + PVV APRRS R ++++++LL++++EP
Sbjct: 737 QETPETVSATTEPQQEDQSVAPPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLDNDEPK 796
Query: 77 TYTEAMTSPDTEAMTSPDSEKWLGAMKSEMESMSENQVWDLVDLLDGVKPIGCKWIFKMK 136
TY EAM D S KWLGAMKSE+ESM +NQVW+LVD DGVK I CKW+FK K
Sbjct: 797 TYEEAMVGHD--------SNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKK 848
Query: 137 TDKDGNVSVFKARLVAKGYRQVQGIDY----APVAMLKSIRIILAIAAH 181
D DGNV ++KARLVAKG++Q+QG+DY +PVAMLKSIRIILAIAA+
Sbjct: 849 ADMDGNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAY 897