BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0860.1
(224 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010243796.1 PREDICTED: pentatricopeptide repeat-containing pr... 362 e-120
XP_009356158.1 PREDICTED: pentatricopeptide repeat-containing pr... 335 e-110
XP_004298459.1 PREDICTED: pentatricopeptide repeat-containing pr... 333 e-110
>XP_010243796.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Nelumbo nucifera]
Length = 570
Score = 362 bits (929), Expect = e-120, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 193/218 (88%), Gaps = 1/218 (0%)
Query: 7 KKCKPSPHIYCSLINGLGAEKRLDEALEIFEKSKVSN-PPEIPTYNAVVGSYCWSMRLHD 65
K CKP+PHIYC+LINGLG++KRLDEALE F+ SK S PEIPTYNAVVG+YCWSMR++D
Sbjct: 342 KNCKPTPHIYCTLINGLGSDKRLDEALEFFQLSKASGFIPEIPTYNAVVGAYCWSMRMND 401
Query: 66 VYRIVDEMRKNGVGPNSRTYDIIIHHLIKVRRWKEAYSVFQRMESEFGCEPSLNTYTIIV 125
+RIVDEM++ GVGPNSRT+DII+HHLIK RR KEAY+VFQRM SE GCEPSL+TYTIIV
Sbjct: 402 AFRIVDEMKRCGVGPNSRTFDIILHHLIKARRTKEAYTVFQRMGSEVGCEPSLSTYTIIV 461
Query: 126 RMLCEEERVDMALKVWDLMKERGILPSMHMFSSLINSLCVENRLDDACQYFQDMLDLGIR 185
M C+EERVDMALKVWD MK +G+LPSMHMFS+LIN +C ENRLDDAC+YFQ+MLDLGIR
Sbjct: 462 AMFCKEERVDMALKVWDQMKSKGVLPSMHMFSALINGMCYENRLDDACKYFQEMLDLGIR 521
Query: 186 PPGQLYSNLKQALLDSGKKDEALHLGMKLDEIRKTPLI 223
PP Q+YSNLKQ+L++ GK D AL LG KLD++RKTPL+
Sbjct: 522 PPAQMYSNLKQSLIEEGKSDIALILGQKLDKLRKTPLV 559
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 16 YCSLINGLGAEKRLDEALEIFEK-SKVSNPPEIPTYNAVVGSYCWSMRLHDVYRIVDEMR 74
+ +I ++++EA+E FE K PE+ +N ++ + S + ++ DEM+
Sbjct: 211 FALIIRRYARARKINEAIETFETMEKFGMKPELSDFNRLIDTLSKSRHVAKAQQVFDEMK 270
Query: 75 KNGVGPNSRTYDIIIHHLIKVRRWKEAYSVFQ-----RMESEFGCEPSLNTYTIIVRMLC 129
P+ +TY I++ W EA S+ + R + G EP + TY II+ C
Sbjct: 271 HRRFVPDLKTYTILLEG------WGEAESLLRVEEIRREMRDEGFEPDVVTYGIIINAYC 324
Query: 130 EEERVDMALKVWDLMKERGILPSMHMFSSLINSLCVENRLDDACQYFQDMLDLGIRPPGQ 189
+ + D A+ ++ M+ + P+ H++ +LIN L + RLD+A ++FQ G P
Sbjct: 325 KMRKYDEAIDLYREMEAKNCKPTPHIYCTLINGLGSDKRLDEALEFFQLSKASGFIPEIP 384
Query: 190 LYSNLKQALLDSGKKDEALHLGMKLDEIRK 219
Y+ + A S + ++A + +DE+++
Sbjct: 385 TYNAVVGAYCWSMRMNDAFRI---VDEMKR 411
>XP_009356158.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Pyrus x bretschneideri]
Length = 523
Score = 335 bits (860), Expect = e-110, Method: Compositional matrix adjust.
Identities = 149/220 (67%), Positives = 184/220 (83%), Gaps = 1/220 (0%)
Query: 5 DDKKCKPSPHIYCSLINGLGAEKRLDEALEIFEKSKVSN-PPEIPTYNAVVGSYCWSMRL 63
+ K K +PHI+C LINGLG+EKRL EALE FE +K S PE PTYNA+VGSYCWSMR+
Sbjct: 301 EAKNIKATPHIFCILINGLGSEKRLSEALEFFELNKASGFIPEAPTYNALVGSYCWSMRM 360
Query: 64 HDVYRIVDEMRKNGVGPNSRTYDIIIHHLIKVRRWKEAYSVFQRMESEFGCEPSLNTYTI 123
D +R+VDEMRK G+GPN+RTYDII+HHL+K RR ++AYS+FQ+M E GCEP+++TY I
Sbjct: 361 QDTFRVVDEMRKCGIGPNARTYDIILHHLVKARRTEQAYSIFQQMSREPGCEPTVSTYEI 420
Query: 124 IVRMLCEEERVDMALKVWDLMKERGILPSMHMFSSLINSLCVENRLDDACQYFQDMLDLG 183
+VRM C EERVDMA++VWD MK RG+LP MHMFS+LINSLC N+LDDAC+YFQ+MLD G
Sbjct: 421 MVRMFCNEERVDMAMQVWDQMKTRGVLPGMHMFSTLINSLCHGNKLDDACKYFQEMLDAG 480
Query: 184 IRPPGQLYSNLKQALLDSGKKDEALHLGMKLDEIRKTPLI 223
IRPP QL+SNLKQALLD G+KD + LG+K+D +RKTPL+
Sbjct: 481 IRPPAQLFSNLKQALLDGGRKDVVISLGLKIDRLRKTPLV 520
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 27 KRLDEALEIFEK-SKVSNPPEIPTYNAVVGSYCWSMRLHDVYRIVDEMRKNGVGPNSRTY 85
K++ EA++ FEK +K E +N ++ + S ++ + D+M+K P+ ++Y
Sbjct: 183 KKVKEAIDAFEKMAKFGMKVEGSDFNRLIDTLSKSRQVERAQEVFDKMKKRRFEPDIKSY 242
Query: 86 DIIIHHLIKVRRWKEAYSVFQRMESEFGCEPSLNTYTIIVRMLCEEERVDMALKVWDLMK 145
I++ + + + V++ M+ E G +P + TY I++ C+ ++ D A+ ++ M+
Sbjct: 243 TILLEGWGQEQNFLRLNEVYREMKDE-GFDPDVVTYAILINAHCKAKKYDEAIDLFREME 301
Query: 146 ERGILPSMHMFSSLINSLCVENRLDDACQYFQDMLDLGIRPPGQLYSNLKQALLDSGKKD 205
+ I + H+F LIN L E RL +A ++F+ G P Y+ L + S +
Sbjct: 302 AKNIKATPHIFCILINGLGSEKRLSEALEFFELNKASGFIPEAPTYNALVGSYCWSMRMQ 361
Query: 206 EALHLGMKLDEIRK 219
+ + +DE+RK
Sbjct: 362 DTFRV---VDEMRK 372
>XP_004298459.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Fragaria vesca subsp. vesca]
Length = 515
Score = 333 bits (855), Expect = e-110, Method: Compositional matrix adjust.
Identities = 148/219 (67%), Positives = 184/219 (84%), Gaps = 1/219 (0%)
Query: 5 DDKKCKPSPHIYCSLINGLGAEKRLDEALEIFEKSKVSN-PPEIPTYNAVVGSYCWSMRL 63
+ K +PSPHI+C LINGLG+EKRL EALE FE+ K S E PTYNAVVG+YCWSMR+
Sbjct: 293 EAKNVRPSPHIFCMLINGLGSEKRLAEALEFFERFKASGLEAEAPTYNAVVGAYCWSMRM 352
Query: 64 HDVYRIVDEMRKNGVGPNSRTYDIIIHHLIKVRRWKEAYSVFQRMESEFGCEPSLNTYTI 123
D +R+VDEMRK G+GPNSRTYDII+HHL+K RR ++AYSVFQR+ E GCEP+++TY I
Sbjct: 353 SDAFRVVDEMRKCGIGPNSRTYDIILHHLVKHRRTEQAYSVFQRISREPGCEPTVSTYEI 412
Query: 124 IVRMLCEEERVDMALKVWDLMKERGILPSMHMFSSLINSLCVENRLDDACQYFQDMLDLG 183
+VRM C E RVDMAL+VWD MK +G+LP MHMFS+LIN+LC EN+LD+AC+YFQDMLD+G
Sbjct: 413 LVRMFCNENRVDMALQVWDQMKTKGVLPRMHMFSTLINTLCHENKLDEACRYFQDMLDMG 472
Query: 184 IRPPGQLYSNLKQALLDSGKKDEALHLGMKLDEIRKTPL 222
IRPP QL+SNLKQALLD G+KD + G+K++++RKTPL
Sbjct: 473 IRPPTQLFSNLKQALLDDGRKDAVISFGLKIEKLRKTPL 511
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 27 KRLDEALEIFEK-SKVSNPPEIPTYNAVVGSYCWSMRLHDVYRIVDEMRKNGVGPNSRTY 85
+R+ +A++ FEK K E +N ++ + S ++ + DEM++ P+ ++Y
Sbjct: 175 RRVSDAIKAFEKMEKFGIKLEGSDFNRLIDTLSKSRQVEKAQEVFDEMKQRRFKPDIKSY 234
Query: 86 DIIIHHLIKVRRWKEAYSVFQRMESEFGCEPSLNTYTIIVRMLCEEERVDMALKVWDLMK 145
I++ + + + V++ M++E G +P + TY I++ C+ ++ + + ++ M+
Sbjct: 235 TILLEGWGQQQNFLRLDEVYREMKAE-GFDPDVVTYGILINAHCKAKKYNEVIGLFREME 293
Query: 146 ERGILPSMHMFSSLINSLCVENRLDDACQYFQDMLDLGIRPPGQLYSNLKQALLDSGKKD 205
+ + PS H+F LIN L E RL +A ++F+ G+ Y+ + A S +
Sbjct: 294 AKNVRPSPHIFCMLINGLGSEKRLAEALEFFERFKASGLEAEAPTYNAVVGAYCWSMRMS 353
Query: 206 EALHLGMKLDEIRK 219
+A + +DE+RK
Sbjct: 354 DAFRV---VDEMRK 364