BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0870.1
(490 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010272762.1 PREDICTED: pentatricopeptide repeat-containing pr... 662 0.0
XP_010256480.1 PREDICTED: pentatricopeptide repeat-containing pr... 659 0.0
XP_002285135.1 PREDICTED: pentatricopeptide repeat-containing pr... 645 0.0
>XP_010272762.1 PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Nelumbo nucifera] XP_010272763.1
PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Nelumbo nucifera] XP_010272765.1
PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Nelumbo nucifera]
Length = 593
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/449 (71%), Positives = 371/449 (82%), Gaps = 24/449 (5%)
Query: 56 NQGQNYPPRGNPNPNQWNNQNQG--------------QNYPQRGNPNPNQWNNQDPNQRQ 101
+QGQNY R NPN QW++QNQ QN+ QRG P+ QWN QD NQ+Q
Sbjct: 155 SQGQNYAQRSNPN--QWSSQNQSFAQRTNLNQRNSQDQNFAQRGAPD--QWNPQDQNQKQ 210
Query: 102 AGVNQVPHYPPQNVDLMGLCREGKVKEAVDFLNQGVPADAHIFFALLDSCGNSKLIEEGR 161
N P+ PP NVDLM LCREGK+KEAVDF+ QGV AD F ALL+SC NSKL+EEG+
Sbjct: 211 VVENGAPNVPPANVDLMSLCREGKIKEAVDFMIQGVRADLPAFHALLNSCANSKLLEEGK 270
Query: 162 KVNSFLMRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHLMMNGFAVNG 221
KV+ +++RSP R DLQL NK I+M+ KCGSM DAR VFDR+ E+N+D+WHLM+NG+A+NG
Sbjct: 271 KVHDYVLRSPCRTDLQLMNKVIEMYIKCGSMTDARRVFDRISERNMDTWHLMINGYAMNG 330
Query: 222 QGDDGLQVFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFIHFELMKNDFGVAPGIEHY 281
QGDDGLQ+FE MRKLG+ PN +TFLAV +ACASAEAVEE FIHFE MKN++G++PGIEHY
Sbjct: 331 QGDDGLQLFEQMRKLGLIPNGQTFLAVLSACASAEAVEEGFIHFESMKNEYGISPGIEHY 390
Query: 282 LGLIDVLGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHGDIDLEDRAEELMVQLDP 341
LG+IDVLG SGH+ EA+EFIE +P EPT +WE LMNFA+IHGDIDLED AEEL+V LDP
Sbjct: 391 LGIIDVLGASGHVTEAKEFIENMPIEPTAAVWETLMNFAKIHGDIDLEDHAEELLVALDP 450
Query: 342 SKAVSNKLPTPPPKKRSTPNNMLEGKNRVSEFRSTTPYKGDVNEKLKGLSGQMREAGYVP 401
SK V+NK+ PPPKKRS +MLEGKNRVSEFRS PYKG E++KGL+ M+EAGYVP
Sbjct: 451 SKVVANKISAPPPKKRSAV-SMLEGKNRVSEFRSAAPYKG---EEVKGLN--MKEAGYVP 504
Query: 402 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMS 461
DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMS
Sbjct: 505 DTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMS 564
Query: 462 KIVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
KIVGR+LIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 565 KIVGRELIVRDNKRFHHFKDGKCSCGDYW 593
>XP_010256480.1 PREDICTED: pentatricopeptide repeat-containing protein
At2g15690-like [Nelumbo nucifera]
Length = 527
Score = 659 bits (1700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/448 (70%), Positives = 369/448 (82%), Gaps = 24/448 (5%)
Query: 57 QGQNYPPRGNPNPNQWNNQNQGQNYPQRGNPN--------------PNQWNNQDPNQRQA 102
Q Q+Y RGNPN QW++QNQ ++ QR NPN PN WN QD NQ+Q
Sbjct: 90 QDQSYAQRGNPN--QWSSQNQ--SFAQRANPNQRNSQDQNFAQRGTPNLWNPQDQNQKQI 145
Query: 103 GVNQVPHYPPQNVDLMGLCREGKVKEAVDFLNQGVPADAHIFFALLDSCGNSKLIEEGRK 162
N P PP NVDLM LCREGK+KEAVDF+ QGV AD F ALL+SC NSKL+EEG+K
Sbjct: 146 VENGAPSAPPANVDLMSLCREGKIKEAVDFMTQGVRADLPTFRALLNSCANSKLLEEGKK 205
Query: 163 VNSFLMRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMPEKNLDSWHLMMNGFAVNGQ 222
V+ +++RSP R DLQL NK I+M+ CGSM DA VFDR+ E+N+D+WHLM+NG+A+NGQ
Sbjct: 206 VHDYVLRSPCRTDLQLMNKVIEMYISCGSMTDACRVFDRISERNMDTWHLMINGYAINGQ 265
Query: 223 GDDGLQVFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFIHFELMKNDFGVAPGIEHYL 282
GDDGLQ+FE MRKLG++P+ +TFLAV +ACASAE VEE FIHFE MKN++G++PGIEHYL
Sbjct: 266 GDDGLQLFEQMRKLGLRPDAQTFLAVLSACASAETVEEGFIHFESMKNEYGISPGIEHYL 325
Query: 283 GLIDVLGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIHGDIDLEDRAEELMVQLDPS 342
G++DVLG SGH+ EA+EFIE +P EPT +WE LMNFA++HGDIDLED AEEL+V LD S
Sbjct: 326 GVVDVLGASGHVTEAKEFIENMPVEPTAAVWETLMNFAKLHGDIDLEDHAEELLVVLDSS 385
Query: 343 KAVSNKLPTPPPKKRSTPNNMLEGKNRVSEFRSTTPYKGDVNEKLKGLSGQMREAGYVPD 402
KAV+NK+PT PPKKRS NMLEGKNRVSE+RS TPYKG E++KGL+ M+EAGYVPD
Sbjct: 386 KAVANKIPTQPPKKRSAV-NMLEGKNRVSEYRSATPYKG---EEVKGLN--MKEAGYVPD 439
Query: 403 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDCHNAIKIMSK 462
TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDCHNAIKIMSK
Sbjct: 440 TRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSK 499
Query: 463 IVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
IVGR+LIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 500 IVGRELIVRDNKRFHHFKDGKCSCGDYW 527
>XP_002285135.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15690
[Vitis vinifera]
Length = 593
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/467 (67%), Positives = 368/467 (78%), Gaps = 36/467 (7%)
Query: 56 NQGQNYPPRGNPN----------PNQWNNQ--------NQGQNYPQRGNPN--------- 88
+Q Q YPP GNP+ PNQWN Q NQ QNYPQ G+ N
Sbjct: 131 HQNQYYPPTGNPSLGQGYPQQRSPNQWNPQHQNPSHLNNQNQNYPQPGSRNLPSNQNQSY 190
Query: 89 -----PNQWNNQDPNQRQAGVNQVPHYPPQNVDLMGLCREGKVKEAVDFLNQGVPADAHI 143
P+QWNNQ+PNQ Q NQV H PP DLM LC+EGKVKEAV+ + +GV ADA
Sbjct: 191 PHQGSPSQWNNQNPNQAQIVENQVSHAPPSVADLMNLCQEGKVKEAVELMEKGVRADAQC 250
Query: 144 FFALLDSCGNSKLIEEGRKVNSFLMRSPFRGDLQLNNKSIDMFSKCGSMNDARGVFDRMP 203
F+AL +SCG+ KL+EE +KV+ F ++S FR DLQLNNK ++M+ CGSM DAR VFD M
Sbjct: 251 FYALFNSCGSPKLLEEAKKVHDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMA 310
Query: 204 EKNLDSWHLMMNGFAVNGQGDDGLQVFEHMRKLGVQPNQETFLAVFAACASAEAVEEAFI 263
+++DSWHLM+NG+A N GDDGLQ++E MRKLG++PN++TFLAV + CASAEAVEE FI
Sbjct: 311 NRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFI 370
Query: 264 HFELMKNDFGVAPGIEHYLGLIDVLGKSGHLNEAEEFIEKLPFEPTTQIWEALMNFARIH 323
HFE MK ++G+ P EHY+G+IDVLGKSGH+ EA+EFIE++P EP+ +WEALMN+A+IH
Sbjct: 371 HFESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIH 430
Query: 324 GDIDLEDRAEELMVQLDPSKAVSNKLPTPPPKKRSTPNNMLEGKNRVSEFRSTTPYKGDV 383
GDIDLED AEELMV LDP KAV+NK PTPPPKKR T NML+GKNR+SEFR+ T YK D
Sbjct: 431 GDIDLEDHAEELMVALDPLKAVANKTPTPPPKKR-TAINMLDGKNRLSEFRNPTLYKDD- 488
Query: 384 NEKLKGLSGQMREAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 443
EKLK L+G M+EAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI
Sbjct: 489 -EKLKSLNG-MKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRI 546
Query: 444 IKNLRICGDCHNAIKIMSKIVGRQLIVRDNKRFHHFEDGKCSCGDYW 490
IKNLR+CGDCHNAIKIMSKIVGR+LIVRDNKRFHHF+DGKCSCGDYW
Sbjct: 547 IKNLRVCGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 593