BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0970.1
(442 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP65984.1 Retrovirus-related Pol polyprotein from transposon TN... 469 e-156
KYP61429.1 Retrovirus-related Pol polyprotein from transposon TN... 449 e-148
KYP66638.1 Retrovirus-related Pol polyprotein from transposon TN... 439 e-147
>KYP65984.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 789
Score = 469 bits (1208), Expect = e-156, Method: Compositional matrix adjust.
Identities = 233/377 (61%), Positives = 274/377 (72%), Gaps = 46/377 (12%)
Query: 104 KTTTHTTKGATRSRNLLEIIHTDICGPFSTSSIGGEKYFITFMDDFSRYGYIYLMHDKSQ 163
K T HT KGATRS LLEIIHTDICGPF +S EKYFITF+DD+SRYGY+YL+HDKSQ
Sbjct: 170 KQTKHTKKGATRSTQLLEIIHTDICGPFDVNSFNKEKYFITFIDDYSRYGYVYLLHDKSQ 229
Query: 164 AVSVAEVFITEIERQLGRKVKIIRLDRGGEYYGRYDESGQHSGPFAKLLEKLSICAQYSM 223
A++ E++I E+ERQL KVKIIR DRGGEYYGRYDE GQH GPFAK LEK ICAQY+M
Sbjct: 230 AINALEIYIEEVERQLDSKVKIIRSDRGGEYYGRYDERGQHPGPFAKFLEKRGICAQYTM 289
Query: 224 PGTPQQNGVAERRD-----------------------ALKTAVYVLNRVPSKSVPKTPFE 260
PGTPQQNGV+ER + ALK+A+Y+LNRVPSK+VPKTPFE
Sbjct: 290 PGTPQQNGVSERHNRTLLDMVRSMLSNSSLLISLWTYALKSAMYLLNRVPSKAVPKTPFE 349
Query: 261 LWTGRKPSLRHLHVWGCVAEARIYIPNEKKLDSRIVSGFFIGYPDKSKGYRFYCPNHTTR 320
LWTGRKPSLRHLHVWGC A+ R Y P EKKLD+R ++G+FIGYP+KSKGYRFYCPNHTTR
Sbjct: 350 LWTGRKPSLRHLHVWGCPAKIRFYNPQEKKLDARTINGYFIGYPEKSKGYRFYCPNHTTR 409
Query: 321 IVETGNARFLEDFETSGSPEPRNVVIEEVRVAVPIPLHSEKIVV-----PIGSHHTDDAE 375
I+ETGNARF+E+ E SGS PR V I+E+RV VP+ S K+VV PI +H E
Sbjct: 410 IIETGNARFIENGEVSGSETPRKVEIQEMRVQVPLTCISNKVVVPQVIEPINNHE----E 465
Query: 376 QQMTDPPPHNPLE-------------LHRSQRIRKPAISLDYLVYLQESEYDIGTSKEDP 422
QQ DP HN +E L RSQR R+ AI DY+VYLQESE D+G + DP
Sbjct: 466 QQTNDPITHNEVEVNEPIVEEPQQIALRRSQRERRSAIPNDYVVYLQESENDLGI-ENDP 524
Query: 423 VSFSQAMKSDDSFKWID 439
V+FSQA+ D++ KW+D
Sbjct: 525 VTFSQAINGDNAEKWLD 541
>KYP61429.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 736
Score = 449 bits (1154), Expect = e-148, Method: Compositional matrix adjust.
Identities = 221/370 (59%), Positives = 271/370 (73%), Gaps = 33/370 (8%)
Query: 104 KTTTHTTKGATRSRNLLEIIHTDICGPFSTSSIGGEKYFITFMDDFSRYGYIYLMHDKSQ 163
K T HT KGATRS LLEI+HTDICGPF +S G EKYFITF+DD+SRYGY+YL+H+KSQ
Sbjct: 287 KQTKHTKKGATRSTQLLEIVHTDICGPFDVNSFGKEKYFITFIDDYSRYGYVYLLHEKSQ 346
Query: 164 AVSVAEVFITEIERQLGRKVKIIRLDRGGEYYGRYDESGQHSGPFAKLLEKLSICAQYSM 223
AV E+++ E+ERQL +KVK++R DRGGEYYGRY+E+GQH GPFAKLL+K ICAQY+M
Sbjct: 347 AVDALEIYLNEVERQLDKKVKVVRSDRGGEYYGRYNETGQHPGPFAKLLQKRGICAQYTM 406
Query: 224 PGTPQQNGVAERRD-----------------------ALKTAVYVLNRVPSKSVPKTPFE 260
PGTPQQNGV+ERR+ ALKTA+Y+LNRVPSK+V KTPFE
Sbjct: 407 PGTPQQNGVSERRNRTLMDMVRSMLSNSTLPIYLWMYALKTAMYLLNRVPSKAVSKTPFE 466
Query: 261 LWTGRKPSLRHLHVWGCVAEARIYIPNEKKLDSRIVSGFFIGYPDKSKGYRFYCPNHTTR 320
LWTGR PSLRHLHVWGC AE RIY P EKKLD+R +SG+FIGYP+KSKGY FYCPNH R
Sbjct: 467 LWTGRTPSLRHLHVWGCQAEIRIYNPQEKKLDARTISGYFIGYPEKSKGYMFYCPNHNMR 526
Query: 321 IVETGNARFLEDFETSGSPEPRNVVIEEVRVAVPIPLHS-EKIVVPIG-SHHTDDAEQQM 378
IVETGNARF+E+ E SGS P+ V ++EVR+ VP+ S K+ VP+ + ++ EQ
Sbjct: 527 IVETGNARFIENGEVSGSTIPQKVEVKEVRMQVPLTYASGNKVSVPLTVESNNNEEEQHN 586
Query: 379 TDPPPHN--------PLELHRSQRIRKPAISLDYLVYLQESEYDIGTSKEDPVSFSQAMK 430
+P HN + L RSQR ++PAIS DY+VYL E E D ++ DPVSFSQA+
Sbjct: 587 NEPMIHNEPIVEQPQEIALRRSQREKRPAISNDYMVYLHELETDSSINENDPVSFSQAVS 646
Query: 431 SDDSFKWIDV 440
D+S KW++
Sbjct: 647 CDNSEKWLNA 656
>KYP66638.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 550
Score = 439 bits (1128), Expect = e-147, Method: Compositional matrix adjust.
Identities = 221/367 (60%), Positives = 259/367 (70%), Gaps = 50/367 (13%)
Query: 119 LLEIIHTDICGPFSTSSIGGEKYFITFMDDFSRYGYIYLMHDKSQAVSVAEVFITEIERQ 178
LLEIIHTDICGPF +S EKYFITF+DD+SRYGY+YL+HDKSQA++ E++I E+ERQ
Sbjct: 51 LLEIIHTDICGPFDVNSFNKEKYFITFIDDYSRYGYVYLLHDKSQAINALEIYIEEVERQ 110
Query: 179 LGRKVKIIRLDRGGEYYGRYDESGQHSGPFAKLLEKLSICAQYSMPGTPQQNGVAERRD- 237
L KVK IR DRGGEYYGRY+E GQH GPFAK LEK IC QY MPGTPQQNGV+ER +
Sbjct: 111 LDSKVKNIRSDRGGEYYGRYEERGQHPGPFAKFLEKRGICVQYIMPGTPQQNGVSERHNR 170
Query: 238 ----------------------ALKTAVYVLNRVPSKSVPKT----PFELWTGRKPSLRH 271
ALKTA+Y+LNRVPSK+VP T PFELWTGRKPSLRH
Sbjct: 171 TLLDMVRSMLSNSSLPISLWTYALKTAMYLLNRVPSKAVPNTPFELPFELWTGRKPSLRH 230
Query: 272 LHVWGCVAEARIYIPNEKKLDSRIVSGFFIGYPDKSKGYRFYCPNHTTRIVETGNARFLE 331
LHVWGC AE R Y P EKKLD+R +SG+FIGYP+KSKGYRFYCPNHTTRI+ETGNARF+E
Sbjct: 231 LHVWGCPAEIRFYNPQEKKLDARTISGYFIGYPEKSKGYRFYCPNHTTRIIETGNARFIE 290
Query: 332 DFETSGSPEPRNVVIEEVRVAVPIPLHSEKIVV-----PIGSHHTDDAEQQMTDPPPHNP 386
+ E SGS PR V I+E+RV VP+ S K+VV PI +H EQQ DP HN
Sbjct: 291 NGEVSGSETPRKVEIQEMRVQVPLTCISNKVVVPQVIEPINNHE----EQQTNDPITHNE 346
Query: 387 LE-------------LHRSQRIRKPAISLDYLVYLQESEYDIGTSKEDPVSFSQAMKSDD 433
+E L RSQR R+ AI DY++YLQESE D+G + D V+FSQAM D+
Sbjct: 347 VEVNEPIVEEPQQIALRRSQRERRSAIPNDYVIYLQESENDLGI-ENDLVTFSQAMNGDN 405
Query: 434 SFKWIDV 440
+ KW+D
Sbjct: 406 AEKWLDA 412