BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g0980.1
(417 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP31265.1 Retrovirus-related Pol polyprotein from transposon TN... 607 0.0
KYP61428.1 Retrovirus-related Pol polyprotein from transposon TN... 600 0.0
KYP64910.1 Retrovirus-related Pol polyprotein from transposon TN... 571 0.0
>KYP31265.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 425
Score = 607 bits (1564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 282/412 (68%), Positives = 355/412 (86%), Gaps = 3/412 (0%)
Query: 1 MDVKTAFLNGSLDEEVYMEQPEGYSEAGMEHMVCKHNKSIYGLKQASRQWFLKFNDTITA 60
MDVKTAFLNG+L+EEVYM+QPEG+ + EH+VCK NKSIYGLKQASRQW+LKF++ I++
Sbjct: 14 MDVKTAFLNGNLEEEVYMKQPEGFFSSDGEHLVCKLNKSIYGLKQASRQWYLKFHEVISS 73
Query: 61 FGFKENIVDQCIYQKASGSKFIYLVLYVDDTLLATNDLGLLYDTKKFLS-NFEMKDMDEA 119
FGF+ENI+DQC+YQK SGSK +LVLYVDD LLATND G+LY+ K+FLS NF+MKDM EA
Sbjct: 74 FGFEENIMDQCVYQKVSGSKICFLVLYVDDILLATNDKGMLYEVKQFLSKNFDMKDMGEA 133
Query: 120 NFVIGIEIFRDRKQGLLGLSQKKYIERVLERFGMKECSPIETPIMKGDKFNLMQCPQNDL 179
++VIGI+I R+R +G+LGLSQ+ YI +VLERF MK+CSP PI+KGDK L QCP+N+L
Sbjct: 134 SYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSPSVAPIVKGDKLELSQCPKNNL 193
Query: 180 EKKGMGNIPYASAVGSLMYAQICTRPDISFIVGMLGRYQSNPGMAHWKAAKRVMRYLQGT 239
E++ M NIPYASAVGSLMYAQ+CTRPDI+F VG+LGRYQSNPG+ HWKAAK+VMRYLQGT
Sbjct: 194 EREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGVDHWKAAKKVMRYLQGT 253
Query: 240 EDYKLIFRRTDNLEVKGYSDSDFAGCADSRKSTSGYVFLLAGGAISWRSIKQSIYASCTM 299
+D+ LI+RRTD+LEV GYSDSDFAGC D+RKSTSGYVF+LA GA+SW S KQ++ A+ TM
Sbjct: 254 KDFMLIYRRTDSLEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATSTM 313
Query: 300 EAKFVARYEATIHALWLRNFISGLGTVDSIDKPLRIYCDNNAAVYFSKNDKYSSSRGSKH 359
EA+FV+ +EAT H +WL++FISGL VDSI KPL++YCDN+AAV+ +KN+K S SR SKH
Sbjct: 314 EAEFVSCFEATSHGVWLKSFISGLRVVDSIAKPLKLYCDNSAAVFMAKNNK-SGSR-SKH 371
Query: 360 LELKYLIVKEEVRKYTVIIEHVSTMLMVADPLTKGLNTKTFKEHVATMGLSN 411
+++KYL+++E V++ V+IEHVST LM+ADPLTKG+ K FK+HV MGL +
Sbjct: 372 IDIKYLVIRERVKEKKVVIEHVSTELMIADPLTKGMPPKNFKDHVTRMGLGS 423
>KYP61428.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 402
Score = 600 bits (1546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 292/410 (71%), Positives = 340/410 (82%), Gaps = 15/410 (3%)
Query: 1 MDVKTAFLNGSLDEEVYMEQPEGYSEAGMEHMVCKHNKSIYGLKQASRQWFLKFNDTITA 60
MDVK AFLNG+L+E +Y+++ VCK KSIYGLKQASRQW+LKFNDTI +
Sbjct: 1 MDVKIAFLNGNLEENIYLKE------------VCKLKKSIYGLKQASRQWYLKFNDTIVS 48
Query: 61 FGFKENIVDQCIYQKASGSKFIYLVLYVDDTLLATNDLGLLYDTKKFLS-NFEMKDMDEA 119
FGFKENIVD+CIY K SGSK I+L+LYVDD LLATNDLGLL++TKKFLS NFEMKDM EA
Sbjct: 49 FGFKENIVDRCIYLKVSGSKVIFLILYVDDILLATNDLGLLHETKKFLSSNFEMKDMGEA 108
Query: 120 NFVIGIEIFRDRKQGLLGLSQKKYIERVLERFGMKECSPIETPIMKGDKFNLMQCPQNDL 179
++VIGIEIFRDR QGLLGLSQK YI +VLERF M++CS PI KGDKF+L QCP+NDL
Sbjct: 109 SYVIGIEIFRDRSQGLLGLSQKAYINKVLERFRMEKCSASPVPIQKGDKFSLTQCPKNDL 168
Query: 180 EKKGMGNIPYASAVGSLMYAQICTRPDISFIVGMLGRYQSNPGMAHWKAAKRVMRYLQGT 239
E+K M I YAS VGS++Y QICTRPDISF MLGRYQSNPGM HWKAAK+V+RYLQGT
Sbjct: 169 ERKQMEVISYASFVGSIIYTQICTRPDISFAARMLGRYQSNPGMEHWKAAKKVLRYLQGT 228
Query: 240 EDYKLIFRRTDNLEVKGYSDSDFAGCADSRKSTSGYVFLLAGGAISWRSIKQSIYASCTM 299
+ + L +RR+++LEV GYSDSDFAGC DSRKST GYVF+LAGGAISW+S KQ++ AS TM
Sbjct: 229 KCHMLTYRRSNHLEVIGYSDSDFAGCVDSRKSTLGYVFILAGGAISWKSAKQTVVASSTM 288
Query: 300 EAKFVARYEATIHALWLRNFISGLGTVDSIDKPLRIYCDNNAAVYFSKNDKYSSSRGSKH 359
EA+FVA +EATI A WLRNFISGLG VDSI KPL++YCDN+AAV+FSKNDKY S+G+KH
Sbjct: 289 EAEFVACFEATIQANWLRNFISGLGIVDSIAKPLKMYCDNSAAVFFSKNDKY--SKGAKH 346
Query: 360 LELKYLIVKEEVRKYTVIIEHVSTMLMVADPLTKGLNTKTFKEHVATMGL 409
+ELKY VKEEV+K V IEH+ST LM+ADPLTKGL KTF EHV MG+
Sbjct: 347 MELKYFAVKEEVQKQRVSIEHISTNLMIADPLTKGLPPKTFIEHVKNMGI 396
>KYP64910.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 371
Score = 571 bits (1471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 272/369 (73%), Positives = 314/369 (85%), Gaps = 3/369 (0%)
Query: 1 MDVKTAFLNGSLDEEVYMEQPEGYSEAGMEHMVCKHNKSIYGLKQASRQWFLKFNDTITA 60
MDVKTAFLNG L+E+VYM+QP G+ G EHMVCK KSIYGLKQASRQW+LKFNDTI +
Sbjct: 1 MDVKTAFLNGDLEEDVYMDQPMGFINKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTIMS 60
Query: 61 FGFKENIVDQCIYQKASGSKFIYLVLYVDDTLLATNDLGLLYDTKKFLS-NFEMKDMDEA 119
FGFKENIVD+CIY K SGSKFI+LVLYVDD LLATNDLGLL +TKKFLS NFEMKDM EA
Sbjct: 61 FGFKENIVDRCIYLKVSGSKFIFLVLYVDDILLATNDLGLLTETKKFLSRNFEMKDMGEA 120
Query: 120 NFVIGIEIFRDRKQGLLGLSQKKYIERVLERFGMKECSPIETPIMKGDKFNLMQCPQNDL 179
++VIGIEIFRDR QGLLGLSQK YI ++LERF M +CS PI KGDKF+LMQCP+NDL
Sbjct: 121 SYVIGIEIFRDRSQGLLGLSQKAYINKILERFRMDKCSASPVPIQKGDKFSLMQCPKNDL 180
Query: 180 EKKGMGNIPYASAVGSLMYAQICTRPDISFIVGMLGRYQSNPGMAHWKAAKRVMRYLQGT 239
E+K M IPYAS VGSLMY Q CTRPDISF VGMLGRYQSNP + HWKAAK+VMRYLQGT
Sbjct: 181 ERKQMEEIPYASIVGSLMYTQTCTRPDISFAVGMLGRYQSNPDIDHWKAAKKVMRYLQGT 240
Query: 240 EDYKLIFRRTDNLEVKGYSDSDFAGCADSRKSTSGYVFLLAGGAISWRSIKQSIYASCTM 299
+++ L +RR+D+LEV GYSDSDFAGC D+RKST Y+F+LAGGAISW+S KQS+ A+ TM
Sbjct: 241 KEHMLTYRRSDHLEVIGYSDSDFAGCVDTRKSTFDYLFMLAGGAISWKSAKQSVIAASTM 300
Query: 300 EAKFVARYEATIHALWLRNFISGLGTVDSIDKPLRIYCDNNAAVYFSKNDKYSSSRGSKH 359
EA+FVA +EA + A WLRNFIS LG VDSI KPL+IYCDN+A V+FS+NDKY S+G+KH
Sbjct: 301 EAEFVACFEAMVQAKWLRNFISRLGVVDSIAKPLKIYCDNSATVFFSRNDKY--SKGAKH 358
Query: 360 LELKYLIVK 368
+ELKY V+
Sbjct: 359 MELKYFTVE 367