BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1060.1
(531 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010647627.1 PREDICTED: uncharacterized protein LOC104878717, ... 561 0.0
ABD63142.1 Retrotransposon gag protein [Asparagus officinalis] 569 0.0
XP_010675528.1 PREDICTED: uncharacterized protein LOC104891519 [... 566 0.0
>XP_010647627.1 PREDICTED: uncharacterized protein LOC104878717, partial [Vitis
vinifera]
Length = 684
Score = 561 bits (1447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 285/524 (54%), Positives = 375/524 (71%), Gaps = 30/524 (5%)
Query: 8 GDNS-DIFEIFRQVKINIHLLDAIKENLTYAKFLKDICTVKRKHHVKSRVFLANNLSTII 66
GD + +I E+ +QVKINI LLD IK+ YAKFLKD+CTVKR+ + + FL +S II
Sbjct: 143 GDKTLEILEVLKQVKINIPLLDMIKQVPAYAKFLKDLCTVKRRIKLSKKAFLTEQVSAII 202
Query: 67 KENLPPKYKDPGSPTISCTIGETHIKQTLLDLGVNFNLLPYSVYEQLGLGEIKPTKVVLQ 126
+ KYKDPG PTIS IG++ +++ LLDLG + NLLPYS+Y+QLGLGE+K T + L
Sbjct: 203 ENKAMVKYKDPGCPTISVQIGDSFVERALLDLGASVNLLPYSIYKQLGLGELKATSITLS 262
Query: 127 LVDRSIKISRGVVEDVLVQVDKFYFPVDFFILDKKSVMHGESQIPVILGRPFLATSQALL 186
L DRSIK+ RGVVEDVLVQV+KFY+PVDF +LD + + G + +P+ILGRPFLAT+ AL+
Sbjct: 263 LADRSIKVPRGVVEDVLVQVEKFYYPVDFVVLDTEPLKKGMNSVPIILGRPFLATANALI 322
Query: 187 DYRSGSMKLSFGNVTLMVNIFNSCKHPIFDYDEFDVDYDESDVQELHMIESFVQGGLALG 246
+ R+G M+LSFGN+T+ +N+FN CK P+ D+D+ + +E +IE+ VQ
Sbjct: 323 NCRNGLMQLSFGNMTVEMNVFNLCKQPM--------DHDDVENEEACLIEALVQKH---- 370
Query: 247 TQDPLETSLMNCFTFDDEITISKMNSLMDSAPLVDTEMWKVRFESLPIN----EPKPQPS 302
T+ +E ++ F+ TI K + V TE WK ++ +N + + +
Sbjct: 371 TEKLMEENIDEFFS-----TIVKEECVQ-----VATE-WKEKYTIQSLNSVENDEESKKE 419
Query: 303 SIEFPKLDLKPLPNKLKYSYLGQEPSFPVIISSQLTNLQECSLLEVLRDHKGTLGWTIVD 362
+E K +LKPLP+ LKY YL PV+IS+ LT QE LL+VL+++KG +GW+I D
Sbjct: 420 EVEISKPELKPLPHGLKYVYLEANEEKPVVISATLTEEQEMKLLKVLKENKGAIGWSISD 479
Query: 363 LKEINPTVCTHRIHLEDDAKPSREGQRRLNPHIKEVVMAEVLKLLEVGIIYPISDSKWVN 422
LK INP +CTH I+LE++AKP R+ QR+LNP +++VV EVLKLL+ GIIYPISDS WV+
Sbjct: 480 LKGINPLICTHHIYLEENAKPVRQPQRKLNPLMQDVVRNEVLKLLDAGIIYPISDSSWVS 539
Query: 423 PTQVVPKKSGITIAENDANELIPTRKVTGWRVCFDYRKLNSMTKKDHFPLSFIDQILEKL 482
PTQVVPKKSGIT+ +ND ELIPTR TGWRVC D+RKLN++TKKDHFPL F+DQ+LE++
Sbjct: 540 PTQVVPKKSGITVMKNDEGELIPTRLTTGWRVCIDFRKLNAVTKKDHFPLPFLDQVLERV 599
Query: 483 AGHPYYCFLDGYSRYNQINEW--DQEKTTFTCPFGTFAYRRMPL 524
AGH YYCFLDGYS Y QI DQEKTTFTCPFGT+AYRRMP
Sbjct: 600 AGHDYYCFLDGYSGYFQIAIALEDQEKTTFTCPFGTYAYRRMPF 643
>ABD63142.1 Retrotransposon gag protein [Asparagus officinalis]
Length = 1788
Score = 569 bits (1467), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 299/517 (57%), Positives = 374/517 (72%), Gaps = 23/517 (4%)
Query: 13 IFEIFRQVKINIHLLDAIKENLTYAKFLKDICTVKRKHHVKSRVFLANNLSTIIKENLPP 72
I E F+QVKINI LLDAI++ +YAKFLKD+CT KR +V +VFLA NLS I + +P
Sbjct: 478 ILETFKQVKINIPLLDAIEQIPSYAKFLKDLCTKKRTTNVPKKVFLAANLSEIFSKPMPL 537
Query: 73 KYKDPGSPTISCTIGETHIKQTLLDLGVNFNLLPYSVYEQLGLGEIKPTKVVLQLVDRSI 132
KYKDPG PTI C IG THI + LLDLG + NLLPYSVY+QLG+GE+KPT+ LQL DRS+
Sbjct: 538 KYKDPGCPTIPCVIGNTHIDKALLDLGASVNLLPYSVYQQLGVGELKPTRCTLQLADRSV 597
Query: 133 KISRGVVEDVLVQVDKFYFPVDFFILDKKSVMHGESQIPVILGRPFLATSQALLDYRSGS 192
KI +G VEDVL++V +F FPVDF +L+ + V + +SQIPVILGRPFLATS AL++ R+G
Sbjct: 598 KIPKGEVEDVLIKVGEFIFPVDFIVLETQPVSNLKSQIPVILGRPFLATSNALINCRTGQ 657
Query: 193 MKLSFGNVTLMVNIFNSCKHPIFDYDEFDVDYDESDVQELHMIESFVQGGLALGTQDPLE 252
MKLSFGN+T+ +NIFN + P DE +V + I S Q G D
Sbjct: 658 MKLSFGNMTVDLNIFNLGRQPSDPSDE------PMEVNFIQGISSEQQEGEC--ESDSNA 709
Query: 253 TSLMNCFTFDDEITISKMNSLMDSAPLVDTEMWKVRFESLPI-NEPKPQ--PSSIEFPKL 309
+ +M DDE+ I PL++ ++ V ++ P+ EP+ Q PS E PKL
Sbjct: 710 SDIMIEELSDDELEIE---------PLIN-HVFSVGWQREPLETEPRVQLRPSVEEPPKL 759
Query: 310 DLKPLPNKLKYSYLGQEPSFPVIISSQLTNLQECSLLEVLRDHKGTLGWTIVDLKEINPT 369
+LKPLP L+Y+YLG+ S PVIISS+LT Q+ +LL VLR+++ +GWT+ D+K I+PT
Sbjct: 760 ELKPLPENLEYAYLGENESLPVIISSELTTGQKEALLAVLRENREAIGWTMADIKGISPT 819
Query: 370 VCTHRIHLEDDAKPSREGQRRLNPHIKEVVMAEVLKLLEVGIIYPISDSKWVNPTQVVPK 429
+ HRIHL DDAKP+R+ QRRLNP +KE V ++LK L+ GIIYPISDS WV+P QVVPK
Sbjct: 820 IVQHRIHLIDDAKPTRDAQRRLNPVMKEAVRKDILKCLDHGIIYPISDSSWVSPVQVVPK 879
Query: 430 KSGITIAENDANELIPTRKVTGWRVCFDYRKLNSMTKKDHFPLSFIDQILEKLAGHPYYC 489
KSGIT+ +N+ANELIPTR TGWRVC DYRKLN T+KDHFPL FIDQ+LE+LAGH +YC
Sbjct: 880 KSGITVIQNEANELIPTRIQTGWRVCIDYRKLNLATRKDHFPLPFIDQMLERLAGHEFYC 939
Query: 490 FLDGYSRYNQ--INEWDQEKTTFTCPFGTFAYRRMPL 524
FLDGYS YNQ I DQEKTTFTCP+GTFAYRRMP
Sbjct: 940 FLDGYSGYNQIPIAPEDQEKTTFTCPYGTFAYRRMPF 976
>XP_010675528.1 PREDICTED: uncharacterized protein LOC104891519 [Beta vulgaris subsp.
vulgaris]
Length = 1865
Score = 567 bits (1460), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 294/535 (54%), Positives = 381/535 (71%), Gaps = 20/535 (3%)
Query: 1 LVSTQPKGDN---SDIFEIFRQVKINIHLLDAIKENLTYAKFLKDICTVKRKH--HVKSR 55
L + P G N DI E F+QV+IN+ LLDAIK+ YAKFLKD+CT KRK + +
Sbjct: 668 LDAPSPYGKNKQKEDILETFKQVQINLPLLDAIKQIPAYAKFLKDMCTYKRKSKANCSKK 727
Query: 56 VFLANNLSTIIKENLPPKYKDPGSPTISCTIGETHIKQTLLDLGVNFNLLPYSVYEQLGL 115
V L+ +S+I++ N PK+KDPG PTISC IG+ I++ LLDLG + NL+PYSVYEQLGL
Sbjct: 728 VILSEQVSSILQFNYAPKFKDPGVPTISCYIGDHKIEKALLDLGSSVNLIPYSVYEQLGL 787
Query: 116 GEIKPTKVVLQLVDRSIKISRGVVEDVLVQVDKFYFPVDFFILDKKSVMHGESQIPVILG 175
GE++P+ LQL DRS+K+ RG ++DVLV++DK FPVDF +LD + V IPVILG
Sbjct: 788 GELQPSNCTLQLADRSVKVPRGRIDDVLVKIDKGVFPVDFVVLDME-VGQPSKNIPVILG 846
Query: 176 RPFLATSQALLDYRSGSMKLSFGNVTLMVNIFNSCKHPIFDYDEFDVDYDESDVQELHMI 235
RPFLAT+ A ++ RSG M +S N+ + +NIF + HP + +ES+ + +I
Sbjct: 847 RPFLATADATINCRSGEMDVSVLNMRIRLNIFKASSHPTSE--------NESECFFVDVI 898
Query: 236 ESFVQGGL-ALGTQDPLETSLM--NCFTFDDEITISKMNSLMDSAPLVDTEMWKVRFESL 292
+ V+ L + ++D LET+L N FD E ++ S +D P ++T W R E L
Sbjct: 899 DELVEEALPVIISKDSLETNLSHENLKYFDIEELTHELISPLDITPSLETSSWVSRHEPL 958
Query: 293 P-INEPKPQPSSIEFPKLDLKPLPNKLKYSYLGQEPSFPVIISSQLTNLQECSLLEVLRD 351
P ++E PS + P L+LK LP+ LKY +LG + PVIISS+L+N QE +LL+VL D
Sbjct: 959 PPLSESPALPSIMSPPNLELKALPSNLKYIFLGSNETLPVIISSELSNEQELALLKVLSD 1018
Query: 352 HKGTLGWTIVDLKEINPTVCTHRIHLEDDAKPSREGQRRLNPHIKEVVMAEVLKLLEVGI 411
HK +GW+I DLK I+P++C HRI LE++AKP+RE QRRLNPH+KEVVM EV+KLL+ I
Sbjct: 1019 HKKAIGWSIADLKGISPSICMHRIFLEENAKPTREMQRRLNPHMKEVVMKEVVKLLDARI 1078
Query: 412 IYPISDSKWVNPTQVVPKKSGITIAENDANELIPTRKVTGWRVCFDYRKLNSMTKKDHFP 471
IYPISDS+WV+P QVVPKKSGIT+ +N EL+PTR+ TGWRVC DYRKLNS+T+KDHFP
Sbjct: 1079 IYPISDSQWVSPVQVVPKKSGITVVKNSEGELVPTRETTGWRVCIDYRKLNSVTRKDHFP 1138
Query: 472 LSFIDQILEKLAGHPYYCFLDGYSRYNQINEW--DQEKTTFTCPFGTFAYRRMPL 524
L FIDQILEKLAG YYCFLDGYS YNQ+ + DQEKTTFTCP GTFA+RRMP
Sbjct: 1139 LPFIDQILEKLAGQSYYCFLDGYSGYNQLAIYPEDQEKTTFTCPAGTFAFRRMPF 1193