BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1260.1
(136 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006284502.1 hypothetical protein CARUB_v10005703mg [Capsella ... 63 2e-09
XP_010695089.1 PREDICTED: vacuolar protein sorting-associated pr... 50 7e-05
>XP_006284502.1 hypothetical protein CARUB_v10005703mg [Capsella rubella]
XP_006284503.1 hypothetical protein CARUB_v10005703mg
[Capsella rubella] EOA17400.1 hypothetical protein
CARUB_v10005703mg [Capsella rubella] EOA17401.1
hypothetical protein CARUB_v10005703mg [Capsella
rubella]
Length = 218
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 60/118 (50%), Gaps = 36/118 (30%)
Query: 3 FHQTMDEINEQTENIKQIQEALSTLLAQLPTSIRTIIYFPFPKSHQNIYSKDSTFEFQNE 62
+TMDEINEQTEN+KQIQEALST + + D +
Sbjct: 122 VDKTMDEINEQTENMKQIQEALSTPIG---------------------AAADFDEDELEA 160
Query: 63 LEDELEGAALEEQLLQPTTTA---------------SYAKKNSTEEDELASLQAEMTL 105
DELEGA LEEQLLQPTTTA +K + EE+ELA+LQAEM L
Sbjct: 161 ELDELEGAELEEQLLQPTTTAPLPSVPVPAGRQTARPVPQKRTAEEEELAALQAEMAL 218
>XP_010695089.1 PREDICTED: vacuolar protein sorting-associated protein 32 homolog
2-like [Beta vulgaris subsp. vulgaris] XP_010695090.1
PREDICTED: vacuolar protein sorting-associated protein
32 homolog 2-like [Beta vulgaris subsp. vulgaris]
KMS97901.1 hypothetical protein BVRB_4g097520 [Beta
vulgaris subsp. vulgaris]
Length = 219
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 60/118 (50%), Gaps = 36/118 (30%)
Query: 3 FHQTMDEINEQTENIKQIQEALSTLLAQLPTSIRTIIYFPFPKSHQNIYSKDSTFEFQNE 62
+TMDEINEQTEN+KQIQEALS + + D +
Sbjct: 123 VDKTMDEINEQTENLKQIQEALSAPIG---------------------AAADFDEDELEA 161
Query: 63 LEDELEGAALEEQLLQPTTTASYA---------------KKNSTEEDELASLQAEMTL 105
+ELEGA LEEQL+QP TTA A +KN+ EEDELA+LQAEM L
Sbjct: 162 ELEELEGAELEEQLIQPATTAPAAPVHAPAGKQPVRPAPRKNTAEEDELAALQAEMAL 219