BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1310.1
(232 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013679929.1 PREDICTED: uncharacterized protein LOC106384525 [... 276 4e-91
KYP63754.1 Retrovirus-related Pol polyprotein from transposon 41... 275 2e-88
KYP31222.1 Pol polyprotein [Cajanus cajan] 265 1e-85
>XP_013679929.1 PREDICTED: uncharacterized protein LOC106384525 [Brassica napus]
Length = 232
Score = 276 bits (706), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 170/228 (74%), Gaps = 2/228 (0%)
Query: 2 MPLNPILVVEVFDVWGIDFMGPFPNSFRNLYILVAVDYVSKWIEAVASKTNDHKVVTTFL 61
MP N IL VEVF+ WG+DFMGPFP+SF+N YILVAVDYVSKW+EA+AS TND KV T
Sbjct: 1 MPQNYILEVEVFNCWGVDFMGPFPSSFKNEYILVAVDYVSKWVEAIASPTNDAKVATKMF 60
Query: 62 KENILSRFAFKTPIGMPPYRLVYGKACHLPVELEHRTYWAIKQLNFSLDKAGNERKLQLT 121
I R A+KTP+G Y LVYGKACHLPVELE++ WA+K LNF + A R +Q+
Sbjct: 61 SSIIFPRTAYKTPLGTNLYHLVYGKACHLPVELEYKAAWAVKLLNFDIKPATERRMIQIH 120
Query: 122 ELEELRNDAYESARLYKHKMKMFNDKNILRKTFSPGQKVLLYNTRLHLFPGKLRSRWSGP 181
ELEE+R+ AYES+++YK K K ++DK+I+ + F P KVLL+N+RL LFPGKL+SRWSGP
Sbjct: 121 ELEEIRHLAYESSKIYKEKTKAYHDKHIIARNFEPNDKVLLFNSRLRLFPGKLKSRWSGP 180
Query: 182 FTVKFIYPYGAVDIEDKNGSVFNVNGQRLKPFL--EMLNDTEDVSIKD 227
FTVK + PYGAV + D+ G F VNGQRLK +L ++ + +++ + D
Sbjct: 181 FTVKEVRPYGAVVLLDRKGDEFVVNGQRLKHYLVDSIIAEGKEIPLSD 228
>KYP63754.1 Retrovirus-related Pol polyprotein from transposon 412 family
[Cajanus cajan]
Length = 386
Score = 275 bits (702), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 175/264 (66%), Gaps = 51/264 (19%)
Query: 2 MPLNPILVVEVFDVWGIDFMGPFPNSFRNLYILVAVDYVSKWIEAVASKTNDHKVVTTFL 61
+PL IL VEVFD WGIDF+GP P+S+ N YILVAVDYVSKW+EAVA++ D + V FL
Sbjct: 107 LPLQNILEVEVFDCWGIDFVGPLPSSYSNEYILVAVDYVSKWVEAVATQKADARTVIKFL 166
Query: 62 KENILSRF--------------------------------------------------AF 71
K+NI +RF A+
Sbjct: 167 KKNIFTRFGTPRVLISDGGSHFCNTQLKKVLEHYEKTVASSRKDWALKLDDTLWAYRTAY 226
Query: 72 KTPIGMPPYRLVYGKACHLPVELEHRTYWAIKQLNFSLDKAGNERKLQLTELEELRNDAY 131
KTPIG+ P++LVYGKACHLPVELEH+ YWA+K LNF L AG +RKLQL ELEE+R AY
Sbjct: 227 KTPIGLSPFQLVYGKACHLPVELEHKAYWALKALNFDLKAAGEKRKLQLHELEEMRLQAY 286
Query: 132 ESARLYKHKMKMFNDKNILRKTFSPGQKVLLYNTRLHLFPGKLRSRWSGPFTVKFIYPYG 191
ES+R+YK K+K ++D+ I+++ F PGQ+VLL+N+RL LFPGKL+S+WSGPF +K + PYG
Sbjct: 287 ESSRIYKSKVKSYHDRKIVQRNFQPGQQVLLFNSRLRLFPGKLKSKWSGPFVIKSVKPYG 346
Query: 192 AVDIEDKN-GSVFNVNGQRLKPFL 214
A ++E+ N G + VNGQRLKP+L
Sbjct: 347 AGELEEPNSGRSWMVNGQRLKPYL 370
>KYP31222.1 Pol polyprotein [Cajanus cajan]
Length = 306
Score = 265 bits (676), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 133/247 (53%), Positives = 166/247 (67%), Gaps = 26/247 (10%)
Query: 2 MPLNPILVVEVFDVWGIDFMGPFPNSFRNLYILVAVDYVSKWIEAVASKTNDHKVVTTFL 61
MP P+L EVFDV GIDFMGPFP SF YIL+AVDYVSKW+EA A++TND +VV F+
Sbjct: 48 MPQQPMLFCEVFDVRGIDFMGPFPVSFGFSYILLAVDYVSKWVEAKATRTNDARVVMDFV 107
Query: 62 KENILSRFAF----------------------KTPIGMPPYRLVYGKACHLPVELEHRTY 99
+ NI RF K +GM PYR+V+GKACHLPVE+EHR Y
Sbjct: 108 RSNIFCRFGVPRAIVSDQGTHFCNRSMQALLKKYGVGMSPYRVVFGKACHLPVEVEHRAY 167
Query: 100 WAIKQLNFSLDKAGNERKLQLTELEELRNDAYESARLYKHKMKMFNDKNILRKTFSPGQK 159
WA+K NFS+D+AG ERKLQL+EL+E+R +AYE+++ YK K K F+D I RK F GQK
Sbjct: 168 WAVKTCNFSIDQAGEERKLQLSELDEIRLEAYENSKFYKEKTKKFHDSLIARKDFVVGQK 227
Query: 160 VLLYNTRLHLFPGKLRSRWSGPFTVKFIYPYGAVDIE-DKNGSVFNVNGQRLKPFL---E 215
V LYN++L L GKLRS+W GPF V ++PYG V+I+ + F VNG RLKPFL
Sbjct: 228 VRLYNSQLELMGGKLRSKWIGPFVVTNVFPYGTVEIKSESTDKSFKVNGHRLKPFLSNPS 287
Query: 216 MLNDTED 222
+LN E+
Sbjct: 288 LLNAVEE 294