BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1470.1
(538 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP36220.1 Copia protein [Cajanus cajan] KYP68721.1 Copia protei... 369 e-118
KYP42518.1 Retrovirus-related Pol polyprotein from transposon TN... 371 e-117
KZV21171.1 hypothetical protein F511_24735 [Dorcoceras hygrometr... 364 e-112
>KYP36220.1 Copia protein [Cajanus cajan] KYP68721.1 Copia protein [Cajanus
cajan]
Length = 585
Score = 369 bits (946), Expect = e-118, Method: Compositional matrix adjust.
Identities = 194/506 (38%), Positives = 282/506 (55%), Gaps = 48/506 (9%)
Query: 3 KPNAQRPKRARPFCDYCQQHGHVRATCYQLNGYPNRSNSGARPN---RPPRPTGPLAATV 59
KP + R++ CD+C + GH++ C+++ GYP N+ N R + A
Sbjct: 75 KPKGRGGSRSK--CDHCGKTGHIKPNCFEIIGYPENWNTRRTQNDTRRQGHKSNAFLAFE 132
Query: 60 TETVDPPTGAPLATSLTQEEYQGLLSLLDHQRHSNGTSNPTQGSTDAGINFTGIQFLSSP 119
E + P GA A +L H++H + + N I+
Sbjct: 133 DEEKEAPKGAKAAHTL-------------HEKHMTHNTRVHENMAGNNKNLREIE----- 174
Query: 120 WVIDSSAAKHI--CSSLSRFSHYVDAPPQCFVRLPDGKRIQVRHIGTIVFNSNLILKNVL 177
WV+DS A+ H+ C SL + ++ P +V +P G + V +G I + N+ L+NVL
Sbjct: 175 WVLDSGASHHMTPCLSLLKAVRKIEKP--FYVTVPTGNVVLVESMGYIDLDKNIKLENVL 232
Query: 178 LVPEYKINLISVSQLTNSLRCLVTFDFSSCVFQDPVTKMRIGLGDLHEGLYFLRTDIRIC 237
VP++ NLISV +L +C++T+D + CV QD K IGLGD+HEG+Y LR +
Sbjct: 233 FVPQFSCNLISVHKLARDSKCILTYDENRCVLQDQTMKEMIGLGDMHEGVYILRRPTKSI 292
Query: 238 SFSISSNSLYNKDVSDIWHWRLGHPSSSIFKSLISRTQCLKSVSFNKNPCEICPLSKFTR 297
F+ + K+++ WH RLGHP + + + +C ++ + C+IC SK R
Sbjct: 293 YFTA-----FLKNMAGTWHSRLGHPLFEALQKISNIVKC-SFITNKEECCDICHKSKQCR 346
Query: 298 LSFPLSNSTSSRPFELIHADLWGPFSVPSNSGCRYFLTLVDDFTRCTWIFLMSNKSDTTQ 357
F SN+ + PF LIH DLWG ++ S++G YFLT+VDD++R TW++LM +KS+T
Sbjct: 347 FPFNRSNNKAEAPFHLIHYDLWGKYNTASHNGSHYFLTIVDDYSRATWVYLMRHKSETLD 406
Query: 358 FLKNFSNYISTQFDSSISNLQSGQGTFPIPKIQSIRSDNGMEFMNHELQSWFRKKGIIHQ 417
LK F I QF+ + + IRSDNG EF N Q + R++GI+H+
Sbjct: 407 MLKKFCTIIKRQFNVDV---------------KKIRSDNGTEFTNSSFQRYIREEGIVHE 451
Query: 418 TSCPHTPQQNGIVERKHRHILEVARSLRLQAHLPISFWGECVLKAVYLINKLPTPTLQGI 477
TSC TPQQN VERKHRHIL VAR+LR +A+LPI FWGECVL A +LIN+ PT GI
Sbjct: 452 TSCVGTPQQNARVERKHRHILNVARALRFEANLPIHFWGECVLTATHLINRTPTIANSGI 511
Query: 478 SPHEKLLGSPPKFDHLRVFECLCFTR 503
+P+E L G PP +DHLR+F CLC+ +
Sbjct: 512 TPYEMLYGKPPSYDHLRIFGCLCYVK 537
>KYP42518.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 769
Score = 371 bits (953), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/524 (39%), Positives = 295/524 (56%), Gaps = 52/524 (9%)
Query: 2 EKPNAQRPKRARPFCDYCQQHGHVRATCYQLNGYPNRSNSGARPNRPPRPTGPLAATVTE 61
+K N PK P CD+C + GH + C+++ GYP N P R R + T+
Sbjct: 199 KKKNRDGPK---PRCDHCGKIGHDKTKCFEIVGYPANWN----PRRNTRNS-------TK 244
Query: 62 TVDPPTGAPLATSLTQEEYQGLLSLLDHQRHSNGTSNPTQGSTDAGINFTGIQFLSSPWV 121
+ GA LA Q LS S+G+ N +G Q ++ WV
Sbjct: 245 RTEHSGGANLAWENNQGTDGHALSGSQDSGGSHGSKNDY---------MSGNQMINDVWV 295
Query: 122 IDSSAAKHICSSLSRFSHYVDAPPQCFVRLPDGKRIQVRHIGTIVFNSNLILKNVLLVPE 181
+DS A+ H+ S S+ D + +P G + V GT+ N N+ L NVL +PE
Sbjct: 296 LDSGASHHMTSLYSQLDEVQDFSIPLRITVPIGDVVLVHKKGTMKLNENIKLYNVLFIPE 355
Query: 182 YKINLISVSQLTNSLRCLVTFDFSSCVFQDPVTKMRIGLGDLHEGLYFLRTDIRICSFSI 241
++ NLIS+ +LT+ L C+VT+ CV QD K IG G L +G+Y + S
Sbjct: 356 FRCNLISIHKLTHDLNCVVTYSVDECVIQDQTRKRMIGFGRLCDGIYIFTQQVGGYSLVA 415
Query: 242 SSNSLYNKDVSDIWHWRLGHPSSSIFKSLISRTQCLKSVSFNKNP----CEICPLSKFTR 297
SS D++ +WH R+GHPS + +S+ + S SFN N C+IC SK R
Sbjct: 416 SSG-----DITTLWHARMGHPSDQV----LSKLSTIISFSFNANNKMECCDICHRSKQCR 466
Query: 298 LSFPLSNSTSSRPFELIHADLWGPFSVPSNSGCRYFLTLVDDFTRCTWIFLMSNKSDTTQ 357
L F L+ + S+ F+LIH DLWG + S++G YFLT+VDDFTR WI+L+ +K++TT
Sbjct: 467 LPFSLNYNKVSKVFDLIHCDLWGKYHTASHNGSHYFLTIVDDFTRAVWIYLLKDKTETTN 526
Query: 358 FLKNFSNYISTQFDSSISNLQSGQGTFPIPKIQSIRSDNGMEFMNHELQSWFRKKGIIHQ 417
+ N+ + TQFD+ K++ +RSDNG +F+N ++ S+F++ GI+HQ
Sbjct: 527 VIINYYRMVQTQFDT---------------KVKVVRSDNGTKFVNSKIHSFFQEVGILHQ 571
Query: 418 TSCPHTPQQNGIVERKHRHILEVARSLRLQAHLPISFWGECVLKAVYLINKLPTPTLQGI 477
TSC +PQQNG VERKHRHIL VAR+LR QA+LP++FWGECVL A++LIN+ PT QG+
Sbjct: 572 TSCVSSPQQNGRVERKHRHILNVARALRFQANLPLTFWGECVLTAIHLINRTPTVANQGL 631
Query: 478 SPHEKLLGSPPKFDHLRVFECLCFTRRPLVKT-KLDSRASPGIF 520
+P+E L G P + H+RVF CLC+ + KT K +++A IF
Sbjct: 632 TPYEMLYGKQPSYAHIRVFGCLCYAKTLTKKTDKFEAQADRCIF 675
>KZV21171.1 hypothetical protein F511_24735 [Dorcoceras hygrometricum]
Length = 977
Score = 364 bits (934), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/539 (39%), Positives = 292/539 (54%), Gaps = 48/539 (8%)
Query: 10 KRARPFCDYCQQHGHVRATCYQLNGYP------NRSNSGARPNRPPRPTGPLAA--TVTE 61
K P C+ C GH + TCY+L GYP + G + L+A T E
Sbjct: 138 KSDHPRCENCNIVGHTKETCYKLVGYPPGHKLHRKFPQGKSSKNQMKNHQQLSAHNTSQE 197
Query: 62 TVDPPTGAPLATSLTQEEYQGLLSLLDHQRHSNGTSNPTQGSTDAGINFTGIQFLSSPWV 121
P AP S T +Y+ ++ LL+ S+ + G++ ++ S PW+
Sbjct: 198 YTQAPASAP---SFTPAQYEQIIKLLELAPSSDKPAANFAGASQGPVSTPE---HSIPWI 251
Query: 122 IDSSAAKHICSSLSRFSHYVDA-PPQCFVRLPDGKRIQVRHIGTIVFNSNLILKNVLLVP 180
+DS A HI + + VRLP+G + G++ S L NVL VP
Sbjct: 252 LDSGANAHITGTSKNLQNIQPCDSANGSVRLPNGNLTHILSTGSLTIPSFCTLHNVLHVP 311
Query: 181 EYKINLISVSQLTNSLRCLVTFDFSSCVFQDPVTKMRIGLGDLHEGLYFL-------RTD 233
++K NL+S+S+ T C V F C FQD T +G+G L+ GLY+L +TD
Sbjct: 312 DFKFNLLSISKFTKDHHCSVVFYPDFCFFQDLSTGKIMGIGKLYNGLYYLAETPQNIQTD 371
Query: 234 IRICSFSISSNSLYNKDVS-DIWHWRLGHPSSSIFKSLISRTQCLKSVSFN--KNPCEIC 290
+ S ++ S KD+ +IWH R GH S ISR Q L ++ N +PC IC
Sbjct: 372 RILSSPKLTCTSFACKDIDINIWHQRFGHMS-------ISRLQHLPFITQNTLNSPCYIC 424
Query: 291 PLSKFTRLSFPLSNSTSS-RPFELIHADLWGPFSVPSNSGCRYFLTLVDDFTRCTWIFLM 349
P+SK TR FP + T + RPF LIH D WGP+ P+++G RYFLT+VDDF+RCTW+FLM
Sbjct: 425 PISKQTRSMFPAKDHTPAPRPFSLIHMDTWGPYRTPTHNGARYFLTIVDDFSRCTWVFLM 484
Query: 350 SNKSDTTQFLKNFSNYISTQFDSSISNLQSGQGTFPIPKIQSIRSDNGMEFMNHELQSWF 409
KSD +KNF +++TQF++ K+Q+IR+DN ++F+N E + F
Sbjct: 485 HLKSDVLTVIKNFLTFVTTQFNT---------------KVQTIRTDNALDFLNSECNNLF 529
Query: 410 RKKGIIHQTSCPHTPQQNGIVERKHRHILEVARSLRLQAHLPISFWGECVLKAVYLINKL 469
GIIHQ+SCP+TPQQNG+VERKHRHIL VAR+++ QA +P +WGECVL A Y+IN+
Sbjct: 530 NSLGIIHQSSCPYTPQQNGLVERKHRHILNVARAVKFQASIPDIYWGECVLHAAYIINRT 589
Query: 470 PTPTLQGISPHEKLLGSPPKFDHLRVFECLCFTRRPLVKTKLDSRASPGIFRWLSPQSK 528
PTP L +P+E L PP + H+RVF CLCF K D RA +F P K
Sbjct: 590 PTPLLSHKTPYEALFSKPPSYQHMRVFGCLCFASNLKPSHKFDVRARACVFLGYPPHQK 648