BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1600.1
(143 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010086907.1 AP-4 complex subunit sigma [Morus notabilis] EXB2... 281 4e-96
XP_010244396.1 PREDICTED: AP-4 complex subunit sigma [Nelumbo nu... 279 3e-95
XP_012076827.1 PREDICTED: AP-4 complex subunit sigma [Jatropha c... 279 5e-95
>XP_010086907.1 AP-4 complex subunit sigma [Morus notabilis] EXB24698.1 AP-4
complex subunit sigma [Morus notabilis]
Length = 143
Score = 281 bits (720), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 134/143 (93%), Positives = 140/143 (97%)
Query: 1 MGIRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVEHRNYKVIY 60
MGIRFILMVNKQGQTRLAQYYEYLTI++RRALEGEIVRKCL RTE QCSFVEHRNYK++Y
Sbjct: 1 MGIRFILMVNKQGQTRLAQYYEYLTIEERRALEGEIVRKCLARTEQQCSFVEHRNYKIVY 60
Query: 61 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVV 120
RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMV+
Sbjct: 61 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVM 120
Query: 121 NGCIVETNKSNILMPIQLMDKAS 143
NGCIVET+KSNIL PIQLMDKAS
Sbjct: 121 NGCIVETSKSNILAPIQLMDKAS 143
>XP_010244396.1 PREDICTED: AP-4 complex subunit sigma [Nelumbo nucifera]
XP_010244397.1 PREDICTED: AP-4 complex subunit sigma
[Nelumbo nucifera] XP_010244398.1 PREDICTED: AP-4
complex subunit sigma [Nelumbo nucifera]
Length = 143
Score = 279 bits (714), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 133/143 (93%), Positives = 139/143 (97%)
Query: 1 MGIRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVEHRNYKVIY 60
MGIRFIL+VNKQGQTRLAQYYEYLT++QRRALEGEIVRKCL RTE QCSFVEHRNYKV+Y
Sbjct: 1 MGIRFILLVNKQGQTRLAQYYEYLTLEQRRALEGEIVRKCLARTEQQCSFVEHRNYKVVY 60
Query: 61 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVV 120
RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMV+
Sbjct: 61 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVM 120
Query: 121 NGCIVETNKSNILMPIQLMDKAS 143
NGCIVET+K NIL PIQLMDKAS
Sbjct: 121 NGCIVETSKQNILTPIQLMDKAS 143
>XP_012076827.1 PREDICTED: AP-4 complex subunit sigma [Jatropha curcas] KDP33768.1
hypothetical protein JCGZ_07339 [Jatropha curcas]
Length = 143
Score = 279 bits (713), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 131/143 (91%), Positives = 140/143 (97%)
Query: 1 MGIRFILMVNKQGQTRLAQYYEYLTIDQRRALEGEIVRKCLVRTENQCSFVEHRNYKVIY 60
MGIRFILMVNKQGQTRLAQYYE+LT+++RRALEGEIVRKCL RTE QCSFVEHRNYK++Y
Sbjct: 1 MGIRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARTEQQCSFVEHRNYKIVY 60
Query: 61 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVV 120
RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMV+
Sbjct: 61 RRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKAHFMLEEMVM 120
Query: 121 NGCIVETNKSNILMPIQLMDKAS 143
NGCIVET+KSNIL PIQLMDK+S
Sbjct: 121 NGCIVETSKSNILAPIQLMDKSS 143