BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000093.1_g1650.1
(243 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016647342.1 PREDICTED: uncharacterized mitochondrial protein ... 349 e-118
AFP55546.1 gag-pol polyprotein [Rosa rugosa] 353 e-110
KYP39695.1 Copia protein [Cajanus cajan] 328 e-109
>XP_016647342.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Prunus mume]
Length = 314
Score = 349 bits (895), Expect = e-118, Method: Compositional matrix adjust.
Identities = 172/243 (70%), Positives = 198/243 (81%), Gaps = 1/243 (0%)
Query: 1 MLDCQPAITHMEENHKLELLPDQVPTNKDRYQRLVGKLIYLSHTRPDIAYVVSVVSQFMH 60
M +PA ME NH+L PDQVPTNK+RYQRLVGKLIYL HT PDIAY VSVVSQFMH
Sbjct: 62 MSASKPADMPMELNHQLGEYPDQVPTNKERYQRLVGKLIYLGHTIPDIAYAVSVVSQFMH 121
Query: 61 APSDEAHMDAVTRILRYLKLAPGEGLMFSSHGHFDFEGYTNADWADNVTDRRSTSGYFTI 120
APS EAH+DAV RI+RYLK + G LMF+ HGH D EG+T+ADWA VTDRRSTSGYFT
Sbjct: 122 APS-EAHVDAVNRIMRYLKSSLGIRLMFTRHGHLDVEGHTDADWAGFVTDRRSTSGYFTF 180
Query: 121 VGGNLVTWRSTKQKVVFRSSIEFEYRSMAQGICELLWIRNLMKELGFKSQQAMELHYDSK 180
VGGNLV+WRS KQKVV RSS E EYR MA ICELLWIRNL+ ELGFK + A +L+ D+K
Sbjct: 181 VGGNLVSWRSKKQKVVSRSSAEAEYRGMAHRICELLWIRNLLGELGFKPKHATQLNCDNK 240
Query: 181 ATIDIANNPVQNDTTKHFEVDRHLIKEKLDSNIIKVSFVRSEDQLADILTKAVNSQIFSN 240
A I IA+NPVQ+DTTKH EVDRH IKEKL++ IIKVSFV+S+DQLAD+LTKAV ++F +
Sbjct: 241 AAIYIAHNPVQHDTTKHVEVDRHFIKEKLEAKIIKVSFVKSKDQLADVLTKAVICRVFHS 300
Query: 241 ALS 243
+LS
Sbjct: 301 SLS 303
>AFP55546.1 gag-pol polyprotein [Rosa rugosa]
Length = 1180
Score = 353 bits (905), Expect = e-110, Method: Compositional matrix adjust.
Identities = 165/242 (68%), Positives = 201/242 (83%), Gaps = 1/242 (0%)
Query: 1 MLDCQPAITHMEENHKLELLPDQVPTNKDRYQRLVGKLIYLSHTRPDIAYVVSVVSQFMH 60
MLDC+P T +E+NH+L DQVPTNK RYQRLVG+LIYLSHTRPD+AY VSVVSQFMH
Sbjct: 928 MLDCKPVATPIEQNHQLAEYLDQVPTNKGRYQRLVGRLIYLSHTRPDLAYAVSVVSQFMH 987
Query: 61 APSDEAHMDAVTRILRYLKLAPGEGLMFSSHGHFDFEGYTNADWADNVTDRRSTSGYFTI 120
PS EAHMDAV RIL+YLK APG+GL+FS + H D GYT+ADWA ++TDRRSTSGYFT
Sbjct: 988 NPS-EAHMDAVFRILQYLKSAPGKGLIFSKYSHLDVSGYTDADWAGSITDRRSTSGYFTF 1046
Query: 121 VGGNLVTWRSTKQKVVFRSSIEFEYRSMAQGICELLWIRNLMKELGFKSQQAMELHYDSK 180
VGGNLVTW+S KQKVV RSS E EYR MA+G+CE+LW+RNL+ +LGF+ ++AM L+ D+K
Sbjct: 1047 VGGNLVTWKSKKQKVVARSSAEAEYRGMARGLCEMLWLRNLLNDLGFRQKKAMPLYCDNK 1106
Query: 181 ATIDIANNPVQNDTTKHFEVDRHLIKEKLDSNIIKVSFVRSEDQLADILTKAVNSQIFSN 240
A I+IA+NPVQ+D TKH EVDRH IKEKLD II FV +E+QLADILTKA++++ F +
Sbjct: 1107 AAIEIAHNPVQHDRTKHVEVDRHFIKEKLDGQIILFPFVPTEEQLADILTKALSTKAFYD 1166
Query: 241 AL 242
+L
Sbjct: 1167 SL 1168
>KYP39695.1 Copia protein [Cajanus cajan]
Length = 388
Score = 328 bits (842), Expect = e-109, Method: Compositional matrix adjust.
Identities = 155/243 (63%), Positives = 194/243 (79%), Gaps = 1/243 (0%)
Query: 1 MLDCQPAITHMEENHKLELLPDQVPTNKDRYQRLVGKLIYLSHTRPDIAYVVSVVSQFMH 60
ML C+PA T +E NH L + PDQ+ T+K RYQRLVGKLIYLSHTRPDIAY VS+VS+FMH
Sbjct: 136 MLACKPADTPIEMNHSLAIYPDQIETDKHRYQRLVGKLIYLSHTRPDIAYSVSIVSRFMH 195
Query: 61 APSDEAHMDAVTRILRYLKLAPGEGLMFSSHGHFDFEGYTNADWADNVTDRRSTSGYFTI 120
+PS+E HM AV RIL+YLK +PG+GL+FS + EGYT++DWA + T R+STSGYFT
Sbjct: 196 SPSEE-HMTAVYRILKYLKGSPGKGLLFSKNDRACIEGYTDSDWAGDKTTRQSTSGYFTF 254
Query: 121 VGGNLVTWRSTKQKVVFRSSIEFEYRSMAQGICELLWIRNLMKELGFKSQQAMELHYDSK 180
V GNLVTWRS KQKVV RSS E E+R MA GICELLWIR+++ +LG K +Q M L D+K
Sbjct: 255 VEGNLVTWRSKKQKVVARSSAEAEFRGMAYGICELLWIRSILADLGIKYEQPMNLLCDNK 314
Query: 181 ATIDIANNPVQNDTTKHFEVDRHLIKEKLDSNIIKVSFVRSEDQLADILTKAVNSQIFSN 240
A ++IA+NPVQ+D TKH EVDRH IKEKLD+ +I+ +VRSEDQLAD+LTKAV+ ++F
Sbjct: 315 AAVEIAHNPVQHDRTKHVEVDRHFIKEKLDNQVIQTPYVRSEDQLADVLTKAVSGRVFEE 374
Query: 241 ALS 243
++
Sbjct: 375 VIN 377