BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0040.1
(333 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT65344.1 Retrovirus-related Pol polyprotein from transposon TN... 389 e-132
ABG22123.1 polyprotein, partial [Prunus avium] 386 e-132
CAN79684.1 hypothetical protein VITISV_003855 [Vitis vinifera] 372 e-124
>JAT65344.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Anthurium amnicola]
Length = 346
Score = 389 bits (999), Expect = e-132, Method: Compositional matrix adjust.
Identities = 186/308 (60%), Positives = 238/308 (77%), Gaps = 1/308 (0%)
Query: 3 EIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKNYIERVVSRFGMQNAKA 62
EI++LK+ LS EFEMKD+GAAKKILGMEI+R R + KL+L+Q Y+++V+ RF M +AK
Sbjct: 40 EINQLKALLSSEFEMKDLGAAKKILGMEIQRNRGAGKLFLTQARYVQKVLQRFDMWDAKP 99
Query: 63 VSTPLAPHFRLSGKQSHNTTVAKDHMDRVPYASAVGSLMYAMVCTCPDISQAVSVVSKFM 122
VSTPLA HF+LS S +T + +M RVPY+SAVGSLMYAMVCT PDISQAVSVVS++M
Sbjct: 100 VSTPLAVHFKLSASLSPQSTDEEVYMSRVPYSSAVGSLMYAMVCTRPDISQAVSVVSRYM 159
Query: 123 ANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDTCQVSGYVDSDYAGDLDRRRSTIGYVFRV 182
+NPGK HW+AVKW+ RYLKGTV+T L FG ++ +SGYVDSD+AGDLDRRRS GYVF V
Sbjct: 160 SNPGKVHWQAVKWIFRYLKGTVNTCLEFGRNSDILSGYVDSDFAGDLDRRRSLTGYVFSV 219
Query: 183 HGAPVSWRSMLQSTVALSTTEVEYMTMAEGVKEALWLWGLLDDLGIKQEHVDLWCDSQSA 242
G VSW++ LQ TVALSTTE E+M E VKEA+WL GLL +L + + ++CDSQSA
Sbjct: 220 GGCAVSWKATLQPTVALSTTETEFMAATEAVKEAMWLRGLLGELSLGHKETIIYCDSQSA 279
Query: 243 IHLAKNQVHHARTKHIDVRYHFVRDVIEEGDVALMKVHTDENPTDMLTKVVTCSNQMKLQ 302
IHLAKN V HARTKHI +RYHF+R+++ G ++L K+ EN DMLTK+VT + +++L
Sbjct: 280 IHLAKNPVFHARTKHIQLRYHFIRELLNGGTLSLKKIRGTENIADMLTKIVT-TEKLRLC 338
Query: 303 EADISYKE 310
A + +
Sbjct: 339 IASVGLRN 346
>ABG22123.1 polyprotein, partial [Prunus avium]
Length = 276
Score = 386 bits (991), Expect = e-132, Method: Compositional matrix adjust.
Identities = 182/264 (68%), Positives = 220/264 (83%), Gaps = 4/264 (1%)
Query: 2 VEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKNYIERVVSRFGM-QNA 60
VEI++LK+QLS EFEMKD+G A+KILGMEI+R+R+ K+ L QK Y+++V+ RFGM +N+
Sbjct: 13 VEIERLKTQLSNEFEMKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQRFGMNENS 72
Query: 61 KAVSTPLAPHFRLSGKQSHNTTVAKDHMDRVPYASAVGSLMYAMVCTCPDISQAVSVVSK 120
K VSTPLAPHF+LS S NT +M ++PYASAVGSLMYAMVCT PDISQAVS+VS+
Sbjct: 73 KPVSTPLAPHFKLSASMSPNTDEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSR 132
Query: 121 FMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDTCQ---VSGYVDSDYAGDLDRRRSTIG 177
+M NPGK HW+AVKW+LRY+ GTVD GL F D V GYVDSDYAGDLD+RRST G
Sbjct: 133 YMHNPGKGHWQAVKWILRYILGTVDVGLLFQQDKVSGQCVVGYVDSDYAGDLDKRRSTTG 192
Query: 178 YVFRVHGAPVSWRSMLQSTVALSTTEVEYMTMAEGVKEALWLWGLLDDLGIKQEHVDLWC 237
+VF + G PVSWRS+LQSTVALSTTE EYM + E +KEA+WL GLLDDLG++Q+HVD++C
Sbjct: 193 FVFTIAGGPVSWRSILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLDDLGVQQDHVDVYC 252
Query: 238 DSQSAIHLAKNQVHHARTKHIDVR 261
DSQSAI+LAKNQVHHARTKHIDVR
Sbjct: 253 DSQSAIYLAKNQVHHARTKHIDVR 276
>CAN79684.1 hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 372 bits (954), Expect = e-124, Method: Compositional matrix adjust.
Identities = 178/296 (60%), Positives = 227/296 (76%), Gaps = 2/296 (0%)
Query: 1 MVEIDKLKSQLSQEFEMKDMGAAKKILGMEIKRERSSKKLYLSQKNYIERVVSRFGMQNA 60
MVE++KLKS LS+EF+MKD+G KKI+G+EI R+R+ +L+LSQ NY++R++ RF M NA
Sbjct: 100 MVEVNKLKSLLSKEFDMKDLGVTKKIIGIEIHRDRALGRLWLSQHNYVKRMLERFNMDNA 159
Query: 61 KAVSTPLAPHFRLSGKQSHNTTVAKDHMDRVPYASAVGSLMYAMVCTCPDISQAVSVVSK 120
K VSTPLA HFRLS Q T + M +VPYASAVG LMYAMVCT D++ AVSVVSK
Sbjct: 160 KPVSTPLANHFRLSTSQCPKTDGEVNDMSKVPYASAVGCLMYAMVCTRLDLAHAVSVVSK 219
Query: 121 FMANPGKTHWEAVKWVLRYLKGTVDTGLCFGGDTC--QVSGYVDSDYAGDLDRRRSTIGY 178
F++NPG+ +W+AVKW+ RYL+GT D G+ F V GYVD+DYAGDLD RRSTIGY
Sbjct: 220 FLSNPGRMNWDAVKWIFRYLRGTTDYGITFSKQQSDPSVKGYVDADYAGDLDERRSTIGY 279
Query: 179 VFRVHGAPVSWRSMLQSTVALSTTEVEYMTMAEGVKEALWLWGLLDDLGIKQEHVDLWCD 238
VF + G P+ W+SM+QS VAL TT+ EYM +AE KE+LWL GL+ +LGI+Q V L+ D
Sbjct: 280 VFTLGGGPICWKSMIQSLVALYTTKSEYMAIAETTKESLWLTGLVKELGIQQGGVQLYFD 339
Query: 239 SQSAIHLAKNQVHHARTKHIDVRYHFVRDVIEEGDVALMKVHTDENPTDMLTKVVT 294
+QSAI+L KNQV+HARTKHIDVR+H + +++ G++ L KVHT EN DMLTK VT
Sbjct: 340 NQSAIYLEKNQVYHARTKHIDVRFHKISELVSSGELLLKKVHTSENAADMLTKPVT 395