BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0060.1
(321 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN... 228 2e-69
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 218 2e-66
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 224 1e-62
>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 228 bits (581), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 203/314 (64%), Gaps = 17/314 (5%)
Query: 12 KYEIEKFNGKNNFSYWRMQMKNLLISQKLHKTLTG--KKPGDMSDEDWEELDLEARATIM 69
++++EKF G+N+FS R++M+ LL+ Q L L G K P +SD++ ++L +A +TI+
Sbjct: 4 RFDVEKFTGENDFSLRRIKMQALLVHQGLDDALQGASKLPSTLSDKEKKDLLSKAHSTII 63
Query: 70 LCLERDVAFLVDGETTAASVWLKLENNFMTKTLTNRVYLKSKLFTCRMEEGSSIQEYVNS 129
L L +V V E +AA +WLKLE+ +MTK+LTN++YLK +L +MEEGSSI+E+V+
Sbjct: 64 LSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSSIKEHVSL 123
Query: 130 FDRIISDLKDIDVKVEDEDQALILLLSLPKSYENLVQTLMLVGDSLSMEETRNSLLADDL 189
F + + DLK +DV++++EDQA++LL SLP S+ENLV T++ D+L++EE + +L + +L
Sbjct: 124 FTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSREL 183
Query: 190 RKVATNSMASGGVDKEQAQGLFVTRGRSTERGKDGKSRSKSRGSFK--KTCFSYGELGHF 247
+K T + GG D E + RGR +R D KS++K R +K K C+ + GHF
Sbjct: 184 KKKITENKGEGG-DPEA----LMARGRLEKR--DSKSKNKRRSKYKNEKACYYCKKEGHF 236
Query: 248 KAACPKRKLKQKNEGYKGKQEMQEAGYVSEDPDECFSVTEVS-ENISDKWMFDSGASHHM 306
+ CP+RK K+ N Y + ++ V D E V +S + S++W+ DSG S HM
Sbjct: 237 RKECPERK-KKNNGKYNDESDIA----VVADGYESAEVLSISTKKHSEEWILDSGCSFHM 291
Query: 307 CPNREWFTTYRSID 320
PN EWF++Y+ ID
Sbjct: 292 TPNLEWFSSYKEID 305
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 218 bits (555), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 117/253 (46%), Positives = 173/253 (68%), Gaps = 12/253 (4%)
Query: 10 SGKYEIEKFNGKNNFSYWRMQMKNLLISQKLHKTLTGKK--PGDMSDEDWEELDLEARAT 67
S KYEIEKFNG+N+FS WR++M LL+ Q L K L GK+ P ++SD + ++L +A +
Sbjct: 5 STKYEIEKFNGRNDFSLWRVKMCALLVQQGLLKALKGKEHLPSNLSDSEKDDLMEKAHSA 64
Query: 68 IMLCLERDVAFLVDGETTAASVWLKLENNFMTKTLTNRVYLKSKLFTCRMEEGSSIQEYV 127
I+L L +V V E +AA++W KLE+ ++TK+LTNR+Y+K +L+T +M EG+S+ ++
Sbjct: 65 ILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHI 124
Query: 128 NSFDRIISDLKDIDVKVEDEDQALILLLSLPKSYENLVQTLMLVGDSLSMEETRNSLLAD 187
+ F+R+I DLK+IDVK+EDED ALILL LP SYEN V T++ D+L+ E+ R L +
Sbjct: 125 DEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSK 184
Query: 188 DLRKVATNSMASGGVDKE-QAQGLFVTRGRSTERGKDGKSRSKSRGSFKKTCFSYGELGH 246
+L+K GG+ E QA+GL V RGR E+G D K +S+++G KTC++ G+ GH
Sbjct: 185 ELKKKV------GGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAKG---KTCWNCGQKGH 235
Query: 247 FKAACPKRKLKQK 259
F+ C K K +K
Sbjct: 236 FRQDCTKFKDDEK 248
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 224 bits (570), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/253 (47%), Positives = 174/253 (68%), Gaps = 12/253 (4%)
Query: 10 SGKYEIEKFNGKNNFSYWRMQMKNLLISQKLHKTLTGKK--PGDMSDEDWEELDLEARAT 67
S KYEIEKFNG+N+FS WR++M+ LL+ Q L K L GK+ P ++SD + ++L +A +
Sbjct: 127 STKYEIEKFNGRNDFSLWRVKMRALLVQQGLLKALKGKEHLPSNLSDGEKDDLMKKAHSV 186
Query: 68 IMLCLERDVAFLVDGETTAASVWLKLENNFMTKTLTNRVYLKSKLFTCRMEEGSSIQEYV 127
I+L L +V V E +AA+VW KLE+ +MTK+LTNR+Y+K +L+T +M EG+S+ ++
Sbjct: 187 ILLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHI 246
Query: 128 NSFDRIISDLKDIDVKVEDEDQALILLLSLPKSYENLVQTLMLVGDSLSMEETRNSLLAD 187
+ F+R+I DLK+IDVK+EDED ALILL LP SYEN V T++ D+L+ E+ R SL
Sbjct: 247 DEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFK 306
Query: 188 DLRKVATNSMASGGVDKE-QAQGLFVTRGRSTERGKDGKSRSKSRGSFKKTCFSYGELGH 246
+L+K GG+ E QA+GL V RGR E+G D K +S+++G KTC++ G+ GH
Sbjct: 307 ELKKKV------GGIRNENQAEGLVVNRGRGKEKGLDRKGKSRAKG---KTCWNCGQKGH 357
Query: 247 FKAACPKRKLKQK 259
F+ C K K +K
Sbjct: 358 FRQDCTKFKDDEK 370