BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000102.1_g0250.1
         (122 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN28867.1 Transposon Ty3-G Gag-Pol polyprotein, partial [Glycin...    77   3e-14
XP_013613391.1 PREDICTED: uncharacterized protein LOC106319566 [...    76   1e-13
KHN07600.1 Retrovirus-related Pol polyprotein from transposon op...    76   1e-13

>KHN28867.1 Transposon Ty3-G Gag-Pol polyprotein, partial [Glycine soja]
          Length = 493

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 12/125 (9%)

Query: 1   MHALYGSPAPQTMKVQREIKRAQVIVLIDSGSTHNFIDASNPTKLGENSDEANP-DIHVE 59
           +HA+ G PA  T  +   I + +V +LIDSGSTHNFI       +  + ++  P  + V 
Sbjct: 274 LHAMAGVPATDTFYLYGTINKTRVTILIDSGSTHNFIQPRVAKFMNFDVEDTMPLRVMVG 333

Query: 60  IQSLIR--------QFIV---VFSAPTGLSPMKCHDHRITLHPNSSPINVRPYRYAFGQK 108
             S++         Q  +   +F+ P+ L P + HDH I + P+++P+NVRPYRY   QK
Sbjct: 334 NGSVMECNKLCANTQLCIQGHMFTQPSALPPSRQHDHHINILPSANPVNVRPYRYPHFQK 393

Query: 109 NEIEK 113
            EIE+
Sbjct: 394 TEIER 398


>XP_013613391.1 PREDICTED: uncharacterized protein LOC106319566 [Brassica oleracea
           var. oleracea]
          Length = 881

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/55 (61%), Positives = 42/55 (76%)

Query: 60  IQSLIRQFIVVFSAPTGLSPMKCHDHRITLHPNSSPINVRPYRYAFGQKNEIEKI 114
           IQ LIRQF  VF+ PTGL P +  +H ITLH  +SPIN+RPY+Y+  QKNEIEK+
Sbjct: 591 IQRLIRQFKEVFNMPTGLPPKRSREHAITLHERTSPINIRPYQYSHLQKNEIEKL 645


>KHN07600.1 Retrovirus-related Pol polyprotein from transposon opus, partial
           [Glycine soja]
          Length = 466

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 12/125 (9%)

Query: 1   MHALYGSPAPQTMKVQREIKRAQVIVLIDSGSTHNFIDASNPTKLGENSDEANP-DIHVE 59
           +HAL G P+ +T ++   I  + + +LIDSGSTHNF+       L   +   NP ++ V 
Sbjct: 275 LHALSGLPSSETFRLVGIINHSPLTILIDSGSTHNFLQPRLAQFLRLKTQPTNPLNVLVG 334

Query: 60  IQSLIRQFIVV-----------FSAPTGLSPMKCHDHRITLHPNSSPINVRPYRYAFGQK 108
             S+++   V            F  P+ L P +   HRITL PN++PINVRPYRY   QK
Sbjct: 335 NGSVLKCDQVCHDISLLLQDHHFLQPSSLPPPRSIVHRITLLPNTAPINVRPYRYPQFQK 394

Query: 109 NEIEK 113
           +EIEK
Sbjct: 395 SEIEK 399

Top