BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0330.1
(289 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis tha... 120 6e-28
AAD17357.1 contains similarity to retrovirus-related polyprotein... 111 5e-24
CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group] 111 6e-24
>OAP03954.1 hypothetical protein AXX17_AT3G36890 [Arabidopsis thaliana]
Length = 370
Score = 120 bits (300), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 148 SDQGIYVIEVNLANTFDSQSWVFDTGCGAHIIYDVQGLKGIKYLSGRELVLRVANRATVA 207
S GIYVIEVN+ T S WV DTGCGAHI +V GL + L ++ LRVAN A V+
Sbjct: 40 SSSGIYVIEVNVT-TSGSTPWVLDTGCGAHICVNVHGLNNSRTLEEGQVDLRVANGAKVS 98
Query: 208 AKAVGTFSLPLETGLVLELHNCYYVPSISRNIISVSELDKEGYHLLIKKTSVVLYTKVKC 267
A AVGT+SL L + +VLEL NCYYVP+I++NIISVS LD EGY K T K
Sbjct: 99 ALAVGTYSLSLPSCMVLELKNCYYVPAINKNIISVSCLDMEGYPKETKGYYFYHPTDNKV 158
Query: 268 FI 269
F+
Sbjct: 159 FV 160
>AAD17357.1 contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] CAB77943.1 putative transposon protein
[Arabidopsis thaliana]
Length = 769
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 81/126 (64%), Gaps = 5/126 (3%)
Query: 130 KELQLIQKNKRKKEGTHDSDQGIYVIEVNLANTFDSQSWVFDTGCGAHIIYDVQGLKGIK 189
+ L+ ++KNK K S GIYVIEVN+ T W DTGCGAHI ++ G+
Sbjct: 26 EHLENLEKNKTFK----ISSSGIYVIEVNVT-TSGFTPWELDTGCGAHICVNMHGINNSI 80
Query: 190 YLSGRELVLRVANRATVAAKAVGTFSLPLETGLVLELHNCYYVPSISRNIISVSELDKEG 249
+ ++ LR+AN A V+ VGT+SL +G+VLEL NCYYV +I++NIISVS LD EG
Sbjct: 81 TMEEGQVDLRMANGARVSTLVVGTYSLSFPSGMVLELKNCYYVHAINKNIISVSCLDMEG 140
Query: 250 YHLLIK 255
+H LIK
Sbjct: 141 FHFLIK 146
>CAE04999.2 OSJNBb0093G06.7 [Oryza sativa Japonica Group]
Length = 923
Score = 111 bits (277), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 94/148 (63%), Gaps = 7/148 (4%)
Query: 104 SRN-KSRLRKYGTSKAIRRGIGMSESKKELQLIQKNKRKKEGTHDSDQGIYVIEVNLANT 162
+RN K++++K G +K G KK L+ + K+K++ S GI VIE+NLA T
Sbjct: 202 TRNSKTKVQKTGPAK--ETGHWKRNCKKYLEQL---KQKQQNGKSSTSGINVIEINLA-T 255
Query: 163 FDSQSWVFDTGCGAHIIYDVQGLKGIKYLSGRELVLRVANRATVAAKAVGTFSLPLETGL 222
+ SWVFDTG AHI +QGLK + L+ E+ +RV N A VA AVGT SL L +GL
Sbjct: 256 SSTDSWVFDTGLVAHICKSLQGLKRSRSLARGEVDIRVGNGARVAVVAVGTMSLSLPSGL 315
Query: 223 VLELHNCYYVPSISRNIISVSELDKEGY 250
VLEL+NCY +P++ +N+IS S L EGY
Sbjct: 316 VLELNNCYCIPALCKNVISASCLQAEGY 343
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Query: 7 FNLCSILDEDKLNIDNFLDWEKRLRSVLKSTNKESVLDTPIPR-ITANSKIEEQKQAKSI 65
FNL SIL+++KL NF+DW LR VL+ +KE VL P P + N+ ++++ K
Sbjct: 9 FNLRSILEKEKLTGTNFMDWYGNLRIVLRQEHKEFVLTQPFPADLPNNAPAAQRREHKKQ 68
Query: 66 WMKSISVTCHMLATMEPNLQKRFRKMDAHTIIRRLRDMSRNKSRLRKYGTSKAI 119
+ ++C MLATM P LQ+++ +DAHTII LR+M +++R ++ TSK++
Sbjct: 69 CNDYLDISCLMLATMSPELQRQYEALDAHTIITGLRNMFEDQARAERFNTSKSL 122