BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0360.1
(355 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAC95126.1 gag-pol polyprotein [Populus deltoides] 212 1e-57
AGJ83729.1 gag-pol polyprotein, partial [Caragana korshinskii] 206 8e-57
XP_015580995.1 PREDICTED: uncharacterized protein LOC107262065 [... 162 2e-41
>CAC95126.1 gag-pol polyprotein [Populus deltoides]
Length = 1382
Score = 212 bits (539), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 156/285 (54%), Gaps = 61/285 (21%)
Query: 131 LSRKYTSNRFRELLATDGTVHQSSCIDTHEQNGVAERKHRHIVETVRSLLLYAPVPSEYW 190
L +YTSN+F ++LA DGT+HQ+SC DT EQNGVAERKHRHIVET RSLLL A V SE+W
Sbjct: 607 LGGEYTSNKFCQMLALDGTIHQTSCTDTPEQNGVAERKHRHIVETARSLLLSAFVLSEFW 666
Query: 191 GEDVLTS------------------------------------------------KLSSR 202
GE VLT+ KLSSR
Sbjct: 667 GEAVLTAVSLINTIPSSHSSGLSPFEKLYGHVPDYSSFRVFGCTYFVLHPHVERNKLSSR 726
Query: 203 SAMCLFLGYGEGQKGYGSYDPVTHKFYVLVMLYFLEHMPHYFIPANAHDVTPSNLIHIN- 261
SA+C+FLGYGEG+KGY +DP+T K YV + FLEH+P + IP+ H +T S+LIHI+
Sbjct: 727 SAICVFLGYGEGKKGYRCFDPITQKLYVSHHVVFLEHIPFFSIPSTTHSLTKSDLIHIDP 786
Query: 262 ---------TPTAHVEPAAFDVADAHLTCDVPSI---PTADQAPNDMAHPPSRYPHRVPK 309
+P L P TA QA +++ PP R R+ K
Sbjct: 787 FSEDSGNDTSPYVRSICTHNSAGTGTLLSGTPEASFSSTAPQASSEIVDPPPRQSIRIRK 846
Query: 310 FTQLPDFVFFTFSPSFTSFLASIHCHSESSSYKEVVVDSLWQKAM 354
T+LPDF + +S SFTSFLA IHC E SSYKE ++D L Q+AM
Sbjct: 847 STKLPDFAYSCYSSSFTSFLAYIHCLFEPSSYKEAILDPLGQQAM 891
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 78/139 (56%), Gaps = 25/139 (17%)
Query: 1 MQPHVL-FSSEGLFSHISSSGMPSSVWILDSGASHHMSYDLSSFVSLKHISDLPVRTADS 59
+QP + SS G H SSSG+ S W+LDSGASHHMS D SSF S+ +S +PV TAD
Sbjct: 317 LQPQAMSASSIGQLPH-SSSGISHSEWVLDSGASHHMSPDSSSFTSVSPLSSIPVMTADG 375
Query: 60 TQMSLA----------------------IACGGGCGLCDCG-CLVLFSSTCCYVRDVQSQ 96
T M LA + +CD G LV+FS + C V+D+QSQ
Sbjct: 376 TPMPLAGVGSVVTLHLSLPNVYLIPKLKLNLASIGQICDSGDYLVMFSGSFCCVQDLQSQ 435
Query: 97 KLIGTGRRHGALYFVEELK 115
KLIGTGRR LY ++ELK
Sbjct: 436 KLIGTGRRENGLYILDELK 454
>AGJ83729.1 gag-pol polyprotein, partial [Caragana korshinskii]
Length = 732
Score = 206 bits (523), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 128/287 (44%), Positives = 155/287 (54%), Gaps = 71/287 (24%)
Query: 131 LSRKYTSNRFRELLATDGTVHQSSCIDTHEQNGVAERKHRHIVETVRSLLLYAPVPSEYW 190
L +YTSN+F ELLA DGT+HQSSC DT +QNGVAERKHRHI+ET RSLLL A VPSE+W
Sbjct: 123 LGGEYTSNKFSELLAYDGTLHQSSCTDTPQQNGVAERKHRHIIETARSLLLSASVPSEFW 182
Query: 191 GEDVLT------------------------------------------------SKLSSR 202
GE VLT SKLSSR
Sbjct: 183 GEAVLTAVHAINRIPSSVISGLSPFEKLYASVPDYSSLKVFGSTCFVLRPQVERSKLSSR 242
Query: 203 SAMCLFLGYGEGQKGYGSYDPVTHKFYVLVMLYFLEHMPHYFIPANAHDVTPSNLIHINT 262
SA+C+FLGYG+GQKGY YDP K YV + FLEH+P Y + + S L HI+
Sbjct: 243 SAICVFLGYGDGQKGYRCYDPHARKLYVSRHVVFLEHIPFYSFSSESSITNSSELTHID- 301
Query: 263 PTAHVEPAAFDVADAHLTCDVPSIPTADQAPND--MAHPPS-------------RYPHRV 307
P + + D C+V + T P+D PP+ RYP R
Sbjct: 302 PFGPNDSTSSD-------CNVENCRTNTTTPDDDITLVPPTAQPPPAIVDPPPPRYPSRH 354
Query: 308 PKFTQLPDFVFFTFSPSFTSFLASIHCHSESSSYKEVVVDSLWQKAM 354
K TQLPDFV+ T+S SF SFL+SIH SE SSY+E ++D LWQ+AM
Sbjct: 355 RKSTQLPDFVYSTYSASFVSFLSSIHSLSEPSSYEEAILDPLWQQAM 401
>XP_015580995.1 PREDICTED: uncharacterized protein LOC107262065 [Ricinus communis]
Length = 657
Score = 162 bits (411), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/367 (34%), Positives = 170/367 (46%), Gaps = 105/367 (28%)
Query: 2 QPHVLFSSEGLFSHISSSGMPSSVWILDSGASHHMSYDLSSFVSLKHISDLPVRTADSTQ 61
QPH + +S + S SG+ S WILDSGAS+HMS +LSSF SL + V +A T
Sbjct: 98 QPHAMSASSQVGLSSSPSGISHSSWILDSGASNHMSPNLSSFTSLTPKVLVLVMSASGTP 157
Query: 62 M----------------------SLAIACGGGCGLCDCGCLVLFSSTCCYVRDVQSQKLI 99
M S A+ + D GC + FSS C+V+D QSQK+I
Sbjct: 158 MPLQGVGSVITPSLSLSNVYHIPSFALNLAFVGQIYDTGCSISFSSFACFVQDPQSQKVI 217
Query: 100 GTGRRHGALYFVEELKVPDVAA---------------------------------STLDL 126
G G R G LY +++LK P AA +T+ +
Sbjct: 218 GIGYREGGLYVLDQLKTPHTAAVVPGALGNLKSHDISDCSGCKLAKFTALPFPKSTTIFV 277
Query: 127 SSFRL----------------SRKYTS-----NRF-RELLATDGTVHQSSCIDTHEQNGV 164
+ F L SR Y S R+ +LLA DGT++Q+SC DT EQN V
Sbjct: 278 AHFDLIHSIVWGPSPVSTKGGSRYYVSFIDDCTRYCWDLLALDGTIYQTSCTDTLEQNRV 337
Query: 165 AERKHRHIVETVRSLLLYAPVPSEYWGEDVLT-----------------------SKLSS 201
ERKHRHI+E RSLLL A VPSE+WGE VLT +L
Sbjct: 338 VERKHRHILEIARSLLLSASVPSEFWGEGVLTYVHLINRIPISHNSGLSPYERLYGRLPD 397
Query: 202 RSAMCLFLGYGEGQKGYGSYDPVTHKFYVLVMLYFLEHMPHYFIPANAHDVTPSNLIHIN 261
S++ +F G Y + PV+HK YV + FLEH+P++ IP H + +LIHI+
Sbjct: 398 YSSLRVF-----GSTWYRCFGPVSHKLYVSCHVIFLEHIPYFAIPDRPHHIFIYDLIHID 452
Query: 262 TPTAHVE 268
+ V+
Sbjct: 453 SFATDVD 459