BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0380.1
(208 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 168 1e-48
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN... 164 2e-46
KYP36635.1 Retrovirus-related Pol polyprotein from transposon TN... 163 1e-45
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 168 bits (426), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 116/156 (74%), Gaps = 3/156 (1%)
Query: 1 MERAHGQILLCLSNEVLRKVTMEATVGGLWSKLETRYMTKSLTNRLYLTKKLFSLQMLEG 60
ME+AH ILL LS+EVLR+VT E + +W KLE+ Y+TKSLTNRLY+ ++L++L+M EG
Sbjct: 58 MEKAHSAILLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEG 117
Query: 61 ESLKDHMDELNRVFLDLANIDVKFEEEDNAVLLLASLPPSYESFVDSFMSGKTTTTFEDV 120
S+ H+DE NRV LDL NIDVK E+ED A++LL LPPSYE+FVD+ + G+ T TFEDV
Sbjct: 118 TSVNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDV 177
Query: 121 KATLNSKELRRR--SMEESSSGDDLVV-RGRTQLLG 153
+A LNSKEL+++ + + + LVV RGR + G
Sbjct: 178 RAYLNSKELKKKVGGIRNENQAEGLVVNRGRGKEKG 213
>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 164 bits (416), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 135/238 (56%), Gaps = 34/238 (14%)
Query: 1 MERAHGQILLCLSNEVLRKVTMEATVGGLWSKLETRYMTKSLTNRLYLTKKLFSLQMLEG 60
+ +AH I+L L +EVLR+V E + G+W KLE+ YMTKSLTN+LYL K+L L+M EG
Sbjct: 55 LSKAHSTIILSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEG 114
Query: 61 ESLKDHMDELNRVFLDLANIDVKFEEEDNAVLLLASLPPSYESFVDSFMSGKTTTTFEDV 120
S+K+H+ + LDL ++DV+ +EED AV+LL SLP S+E+ VD+ + G+ T T E+V
Sbjct: 115 SSIKEHVSLFTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEV 174
Query: 121 KATLNSKELRRRSMEESSSGDD---LVVRGRTQ--------------------------- 150
KATLNS+EL+++ E G D L+ RGR +
Sbjct: 175 KATLNSRELKKKITENKGEGGDPEALMARGRLEKRDSKSKNKRRSKYKNEKACYYCKKEG 234
Query: 151 -LLGDGPERKKPGEAAVIEEEDDGSVLAIIEECDEATILAINACFAEDWWILDTGCKF 207
+ PERKK +E D + + + + A +L+I+ + WILD+GC F
Sbjct: 235 HFRKECPERKKKNNGKYNDESD---IAVVADGYESAEVLSISTKKHSEEWILDSGCSF 289
>KYP36635.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 364
Score = 163 bits (412), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 133/237 (56%), Gaps = 38/237 (16%)
Query: 2 ERAHGQILLCLSNEVLRKVTMEATVGGLWSKLETRYMTKSLTNRLYLTKKLFSLQMLEGE 61
E+AH ILL LS+EVL +V E T GLW KLE YMTKS+ N+L L ++LF L M EG
Sbjct: 68 EKAHSLILLSLSDEVLYEVADEETASGLWCKLEKLYMTKSICNKLLLKRRLFGLHMKEGT 127
Query: 62 SLKDHMDELNRVFLDLANIDVKFEEEDNAVLLLASLPPSYESFVDSFMSGKTTTTFEDVK 121
LKDH+DELN V ++L +IDVK E+ED A++LLASLPPSYESFV+S GK T E+VK
Sbjct: 128 PLKDHLDELNSVLMELRDIDVKIEDEDAAMILLASLPPSYESFVNSLSVGKECITMEEVK 187
Query: 122 ATLNSKELRRRSM--EESSSGDDLVVRGR-----------TQLLGDGPER-----KKPGE 163
++L+S+E R R+ E S+G LVV + P+ K+PG
Sbjct: 188 SSLHSREFRLRASGNSEESNGSSLVVSNSGKNMKKKKDKSKRKTNVNPKDICNYCKEPGH 247
Query: 164 -------------AAVIEEEDDGSVLAIIEECDEATILAINACFAEDWWILDTGCKF 207
AAV +EE ++ D+ +ED WILD+GC F
Sbjct: 248 WKKDCPKKKGKPSAAVAKEESTSENELVLSIADQPQ-------HSEDQWILDSGCSF 297