BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0700.1
(316 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX62221.1 reverse transcriptase, partial [Cycas revoluta] 144 8e-40
XP_015887748.1 PREDICTED: RNA-directed DNA polymerase homolog [Z... 145 3e-39
XP_013724746.1 PREDICTED: RNA-directed DNA polymerase homolog [B... 142 5e-38
>AAX62221.1 reverse transcriptase, partial [Cycas revoluta]
Length = 115
Score = 144 bits (363), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 74/88 (84%)
Query: 229 VTDKYHIPVIDELLDKLHSAKLFSKLNMRSGYHQIRVKDADIHKMAFRTHEGHYEFIVMQ 288
+ DK+ IPVIDELLD+LH A F+ L++RSGYHQIR+K D+HK AFRTHEGHYEF+VM
Sbjct: 18 IKDKFPIPVIDELLDELHGAMFFTSLDLRSGYHQIRIKAKDVHKTAFRTHEGHYEFLVMP 77
Query: 289 LGLTNGPSTFQSLMNDLFRPHLRKFILV 316
GLTN PSTFQ LMN LFRP+LRKFILV
Sbjct: 78 FGLTNAPSTFQGLMNKLFRPYLRKFILV 105
>XP_015887748.1 PREDICTED: RNA-directed DNA polymerase homolog [Ziziphus jujuba]
Length = 176
Score = 145 bits (365), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 77/88 (87%)
Query: 229 VTDKYHIPVIDELLDKLHSAKLFSKLNMRSGYHQIRVKDADIHKMAFRTHEGHYEFIVMQ 288
+ DKY IPVIDE+LD+LH A+ FSKL++RSGYHQIRV +ADI K AFRT EGHYEF+VMQ
Sbjct: 4 IKDKYPIPVIDEMLDELHKARYFSKLDLRSGYHQIRVHEADIPKTAFRTREGHYEFVVMQ 63
Query: 289 LGLTNGPSTFQSLMNDLFRPHLRKFILV 316
GLTN P+TFQSLMND+F P+L++FILV
Sbjct: 64 FGLTNAPATFQSLMNDIFHPYLQQFILV 91
>XP_013724746.1 PREDICTED: RNA-directed DNA polymerase homolog [Brassica napus]
Length = 181
Score = 142 bits (357), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 62/105 (59%), Positives = 81/105 (77%)
Query: 212 DYSYGEPISNSGSNSRYVTDKYHIPVIDELLDKLHSAKLFSKLNMRSGYHQIRVKDADIH 271
D S+ + N V DK+HIP+ID+LLD+LH A +FSKL++ SGYHQIR+++ D+
Sbjct: 32 DKSWCFCVDYKALNQVTVADKFHIPMIDQLLDQLHGAVIFSKLDLTSGYHQIRMQEEDVE 91
Query: 272 KMAFRTHEGHYEFIVMQLGLTNGPSTFQSLMNDLFRPHLRKFILV 316
K AFRTH GHYEF+VM GLTN P+TFQ+LMN++FRP+L KFILV
Sbjct: 92 KTAFRTHNGHYEFLVMPFGLTNAPATFQALMNEIFRPYLNKFILV 136