BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000102.1_g0880.1
         (175 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAB87099.1 putative retroelement pol polyprotein [Arabidopsis th...    66   2e-09
AAM98191.1 unknown protein [Arabidopsis thaliana] AAR24647.1 At2...    65   2e-09
CAA18107.1 LTR retrotransposon like protein [Arabidopsis thalian...    65   4e-09

>AAB87099.1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 65.9 bits (159), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 3/69 (4%)

Query: 1   MFVGYPHGQKGFRVYDFPTRKIITSRDVLFHEDRFPMSTISSSSSSSSPRSFIFIMDDGS 60
           +F+GYPHG+K +RVYD  T KI  SRDV FHED +P +T + S+    P +   + DD  
Sbjct: 749 VFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLPPPTPPMVNDD-- 806

Query: 61  FQFLATSTK 69
             FL  ST+
Sbjct: 807 -WFLPISTQ 814


>AAM98191.1 unknown protein [Arabidopsis thaliana] AAR24647.1 At2g23330
          [Arabidopsis thaliana] BAE99183.1 putative retroelement
          pol polyprotein [Arabidopsis thaliana]
          Length = 776

 Score = 65.5 bits (158), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 3/69 (4%)

Query: 1  MFVGYPHGQKGFRVYDFPTRKIITSRDVLFHEDRFPMSTISSSSSSSSPRSFIFIMDDGS 60
          +F+GYPHG+K +RVYD  T KI  SRDV FHED +P +T + S+    P +   + DD  
Sbjct: 29 VFIGYPHGKKAWRVYDLETGKIFASRDVRFHEDIYPYATATQSNVPLPPPTPPMVNDD-- 86

Query: 61 FQFLATSTK 69
            FL  ST+
Sbjct: 87 -WFLPISTQ 94


>CAA18107.1 LTR retrotransposon like protein [Arabidopsis thaliana] CAB79159.1
           LTR retrotransposon like protein [Arabidopsis thaliana]
          Length = 1109

 Score = 64.7 bits (156), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 40/59 (67%)

Query: 1   MFVGYPHGQKGFRVYDFPTRKIITSRDVLFHEDRFPMSTISSSSSSSSPRSFIFIMDDG 59
           +FVGYPHGQKG+R++D   +K   SRDV+F E  FP S +S +  +SS ++F+  +  G
Sbjct: 539 VFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEFPYSKMSCNRFTSSHKAFLAAVTAG 597


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