BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g0910.1
(390 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CCH50966.1 T4.5 [Malus x robusta] 303 4e-89
KYP64898.1 Retrovirus-related Pol polyprotein from transposon TN... 298 6e-89
CAN71108.1 hypothetical protein VITISV_001478 [Vitis vinifera] 300 3e-88
>CCH50966.1 T4.5 [Malus x robusta]
Length = 1670
Score = 303 bits (777), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 237/410 (57%), Gaps = 62/410 (15%)
Query: 13 SRKKNRHVTEMGNTLLIQTALPNCFWFDAFSTATYIINRLPTPILGNISPFETLFHKSPD 72
+ +K+RHV EMG TLL Q+ LP FW +AF T Y+INRLP P ISP+E LFH SP
Sbjct: 893 AERKHRHVVEMGRTLLSQSDLPTQFWVEAFQTVVYLINRLP-PQSSVISPWELLFHASPK 951
Query: 73 YTSMKVFGSVCYPYLAHSRTDKLSPKSVKCIFLGYSSIHKGYKCYAIDSSKLHISRHV-F 131
Y ++K FG CYP+L DKL KS +C+FLGYS H GY+C+ S++L+ISRHV F
Sbjct: 952 YHTLKAFGCACYPWLQPYSRDKLDFKSKQCVFLGYSLNHSGYRCWDPISNRLYISRHVVF 1011
Query: 132 CESIFPFKTKCVDKYIPKSATTGHE--VSLPI--PMISHIELPQIEVTQTTAHSSSSVGL 187
ES+FP+K+ S + H VS P+ PM H+ LP + Q ++ +++ G
Sbjct: 1012 DESLFPYKSL-------SSQASHHSPCVSSPLHPPMSLHLPLPVSHLEQQSSPAAALEGR 1064
Query: 188 -VNAISTNETSTSSTPPFS----------------------------HPMTTRSKNGIQR 218
+ S T+ +T P S H M TR+K GI +
Sbjct: 1065 NASPPSIFSTAAHTTIPSSAQESLHTPPVSSSPAEPPPLPPPIPVNTHTMITRAKAGIHK 1124
Query: 219 PKY-------IPDHVAHYTICHPLSYVFMVVLNKFHEPTSFKEASKSVEWSNAMKEEFLA 271
PK +P V T P P++F +ASKS W AM+ EF A
Sbjct: 1125 PKVFTATKHQLPSTVDSLTALPP-------------TPSTFLQASKSSHWMEAMQFEFQA 1171
Query: 272 LEKNQTWSLVPFEPSMNVLGCKWIYKVKQRSDGSLERFKDRLVAKGYHQEDGIDYNETLG 331
L+ TW LVP + N++GCKW++KVK + DG++ER+K RLVAKG+HQ++G+D++ET
Sbjct: 1172 LQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFS 1231
Query: 332 PVVKSTSVRLILTIAVTKSWVIKQLDVSNVFLHGVLKEKVYMTQPLGFVD 381
PV K T++R++L+IAV+ W I QLDVSN FLHG LKE VYM QP GFVD
Sbjct: 1232 PVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVD 1281
>KYP64898.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1007
Score = 298 bits (762), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 173/387 (44%), Positives = 235/387 (60%), Gaps = 37/387 (9%)
Query: 14 RKKNRHVTEMGNTLLIQTALPNCFWFDAFSTATYIINRLPTPILGNISPFETLFHKSPDY 73
+K+RH+TE G TLL Q +LP FW +AF TAT +IN LPTP L N SP+E LFHK+PDY
Sbjct: 255 ERKHRHITETGLTLLAQASLPLSFWGEAFLTATSLINMLPTPNLDNASPYEMLFHKAPDY 314
Query: 74 TSMKVFGSVCYPYLAHSRTDKLSPKSVKCIFLGYSSIHKGYKCYAIDSSKLHISRHV-FC 132
+K+FG CYP L K KS +C+FLGYS HKGY C + S K +ISR+V F
Sbjct: 315 KFLKIFGCACYPLLRPYNPHKFDFKSQQCLFLGYSPSHKGYICLS-PSGKRYISRNVKFF 373
Query: 133 ESIFPFKTKCVDKYIP--KSATTGHEVSLPIPMISHIELPQIEVTQTTAHSSSS-VGLVN 189
E++FP +T+ + +IP +S+ + H S +SH+ + +Q HS+S+ +
Sbjct: 374 ETVFPCQTQ-PNPFIPTIRSSNSVHNNS----DLSHLTV-LTSSSQNNHHSNSNPIVTTT 427
Query: 190 AISTNETS--------------TSSTPPFSHPMTTRSKNGIQRPKYIPDHVAHYTICHPL 235
A+S N+T+ +SS P +H MTTRSK GI +PK + + H +
Sbjct: 428 ALSLNDTNPAAVATVPIIEPGVSSSGPQNAHLMTTRSKAGIFKPKTYAAALVKSSYDHTI 487
Query: 236 SYVFMVVLNKFHEPTSFKEASKSVEWSNAMKEEFLALEKNQTWSLVPFEPSMNVLGCKWI 295
EP + KEA EW AMK+E+ AL NQTWSLV +GCKWI
Sbjct: 488 ------------EPNTVKEALAKPEWLKAMKDEYQALVSNQTWSLVDLPIGYKPIGCKWI 535
Query: 296 YKVKQRSDGSLERFKDRLVAKGYHQEDGIDYNETLGPVVKSTSVRLILTIAVTKSWVIKQ 355
+K K DGS +R K RLVAKGY+Q+ G+D++ET PVVK T+VR++L++A+T W I Q
Sbjct: 536 FKSKYNPDGSFQRHKARLVAKGYNQKPGLDFSETFSPVVKPTTVRIVLSLAITNQWPIHQ 595
Query: 356 LDVSNVFLHGVLKEKVYMTQPLGFVDQ 382
+D++NVFLHG L+E VYM+QP GF Q
Sbjct: 596 IDINNVFLHGDLQESVYMSQPPGFNTQ 622
>CAN71108.1 hypothetical protein VITISV_001478 [Vitis vinifera]
Length = 1354
Score = 300 bits (768), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/398 (42%), Positives = 226/398 (56%), Gaps = 43/398 (10%)
Query: 13 SRKKNRHVTEMGNTLLIQTALPNCFWFDAFSTATYIINRLPTPILGNISPFETLFHKSPD 72
S +++RH+ E G TLL +LPN F AF+TA Y+INRLPT L SPFE +FHKSP+
Sbjct: 599 SERRHRHIVETGLTLLSHASLPNTFXPHAFATAVYLINRLPTTTLNLSSPFELIFHKSPN 658
Query: 73 YTSMKVFGSVCYPYLAHSRTDKLSPKSVKCIFLGYSSIHKGYKCYAIDSSKLHISRHV-F 131
Y+ +KVFG +CYP+L T KL+P S C+FLGYS Y C +SKL++SRHV F
Sbjct: 659 YSRLKVFGCLCYPWLRPYXTHKLTPXSKPCVFLGYSLSQSAYLCLDXSTSKLYVSRHVQF 718
Query: 132 CESIFPFKTKCVDKYIPKSATTGHEVSLPIPMISHIELP---QIEVTQTTAHSSSSVGLV 188
ES+FP+ + P S T +S IP I + P Q E +A SS + L
Sbjct: 719 VESVFPYTSLHTTLPRPNSTT----ISTWIPXILSVSTPTSSQQEAITPSAASSQGLPLF 774
Query: 189 NAIST------NETSTSSTPP-----------------FSHPMTTRSKNGIQRPKYIPDH 225
S ++ S++ P H MTTR+KN I +P
Sbjct: 775 ETTSPPAAPFPHQASSAPQPSPQPSLTTTEPPIPVPPPTQHRMTTRAKNNITKP------ 828
Query: 226 VAHYTICHPLSYVFMVVLNKFHEPTSFKEASKSVEWSNAMKEEFLALEKNQTWSLVPFEP 285
H F PTS +A K W AM +E+ AL +N TW LVP E
Sbjct: 829 -IQKLNLHTHKPTFQTT-----TPTSISQALKDQNWRQAMSDEYDALVRNGTWELVPPED 882
Query: 286 SMNVLGCKWIYKVKQRSDGSLERFKDRLVAKGYHQEDGIDYNETLGPVVKSTSVRLILTI 345
N++GCKWI+++K+ SDGS++R+K RLVAKG+HQ G+DY+ET PVVK T+VRL+L+I
Sbjct: 883 ITNLVGCKWIFRIKRNSDGSIDRYKARLVAKGFHQRPGVDYHETFSPVVKPTTVRLVLSI 942
Query: 346 AVTKSWVIKQLDVSNVFLHGVLKEKVYMTQPLGFVDQN 383
AV+ W ++QLDV+N FL G L E V+M QP GFVD +
Sbjct: 943 AVSNGWSLRQLDVNNAFLQGRLSENVFMAQPPGFVDSD 980