BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1030.1
(255 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010267391.1 PREDICTED: RNA-binding protein 38-like isoform X1... 313 e-104
XP_010267393.1 PREDICTED: RNA-binding protein 38-like isoform X3... 313 e-104
XP_010267392.1 PREDICTED: RNA-binding protein 38-like isoform X2... 312 e-104
>XP_010267391.1 PREDICTED: RNA-binding protein 38-like isoform X1 [Nelumbo
nucifera]
Length = 281
Score = 313 bits (802), Expect = e-104, Method: Compositional matrix adjust.
Identities = 169/245 (68%), Positives = 192/245 (78%), Gaps = 14/245 (5%)
Query: 1 MSQQRQLGMVGGRNNGSQLIDTTYTKIFVGGLAWETKRDTMRHYFEQFGEIQEAVVITDK 60
MSQQRQ MVGG NN Q DTT+TKIFVGGLAWET+R+TMR YFEQFGEIQEAVVITDK
Sbjct: 1 MSQQRQFQMVGG-NNAGQFGDTTFTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDK 59
Query: 61 NTGRSKGYGFVTFKDPDAAIRACQDPSPVIDGRRANCNLACLGANRSYPSSTPQPGNGRF 120
NTG+SKGYGFVTFKDPDAA+RACQDPSPVIDGRRANCNLA LGA+R++P ST Q G GRF
Sbjct: 60 NTGKSKGYGFVTFKDPDAAMRACQDPSPVIDGRRANCNLASLGAHRNHP-STYQHGMGRF 118
Query: 121 KPTLGSI--PSTYEGSSSYFHQQTP-YTFPYSTYGYTGYSQENMYQMNYYNVY--GGQQL 175
+P GS+ P+ + SS+YFHQ T Y+FPYS YGY+GYSQEN Y MNYY+VY GGQQ
Sbjct: 119 RPARGSVALPAYHGTSSTYFHQPTAQYSFPYSAYGYSGYSQENTYPMNYYSVYGGGGQQF 178
Query: 176 SPYYTAASGAPG--GVFPNYYPYYLQ---GNNGQGLRVQYPQWVQYPYLSQPY--TPPIL 228
SPYY A + +PG G+F N+YP+Y Q N QG +QYPQ VQYPYL Q Y +L
Sbjct: 179 SPYYAATAASPGAPGIFHNFYPFYAQYIHSNQSQGFGIQYPQMVQYPYLPQHYGGAGGVL 238
Query: 229 PIPTS 233
IPTS
Sbjct: 239 SIPTS 243
>XP_010267393.1 PREDICTED: RNA-binding protein 38-like isoform X3 [Nelumbo
nucifera]
Length = 275
Score = 313 bits (801), Expect = e-104, Method: Compositional matrix adjust.
Identities = 169/245 (68%), Positives = 192/245 (78%), Gaps = 14/245 (5%)
Query: 1 MSQQRQLGMVGGRNNGSQLIDTTYTKIFVGGLAWETKRDTMRHYFEQFGEIQEAVVITDK 60
MSQQRQ MVGG NN Q DTT+TKIFVGGLAWET+R+TMR YFEQFGEIQEAVVITDK
Sbjct: 1 MSQQRQFQMVGG-NNAGQFGDTTFTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDK 59
Query: 61 NTGRSKGYGFVTFKDPDAAIRACQDPSPVIDGRRANCNLACLGANRSYPSSTPQPGNGRF 120
NTG+SKGYGFVTFKDPDAA+RACQDPSPVIDGRRANCNLA LGA+R++P ST Q G GRF
Sbjct: 60 NTGKSKGYGFVTFKDPDAAMRACQDPSPVIDGRRANCNLASLGAHRNHP-STYQHGMGRF 118
Query: 121 KPTLGSI--PSTYEGSSSYFHQQTP-YTFPYSTYGYTGYSQENMYQMNYYNVY--GGQQL 175
+P GS+ P+ + SS+YFHQ T Y+FPYS YGY+GYSQEN Y MNYY+VY GGQQ
Sbjct: 119 RPARGSVALPAYHGTSSTYFHQPTAQYSFPYSAYGYSGYSQENTYPMNYYSVYGGGGQQF 178
Query: 176 SPYYTAASGAPG--GVFPNYYPYYLQ---GNNGQGLRVQYPQWVQYPYLSQPY--TPPIL 228
SPYY A + +PG G+F N+YP+Y Q N QG +QYPQ VQYPYL Q Y +L
Sbjct: 179 SPYYAATAASPGAPGIFHNFYPFYAQYIHSNQSQGFGIQYPQMVQYPYLPQHYGGAGGVL 238
Query: 229 PIPTS 233
IPTS
Sbjct: 239 SIPTS 243
>XP_010267392.1 PREDICTED: RNA-binding protein 38-like isoform X2 [Nelumbo
nucifera]
Length = 277
Score = 312 bits (800), Expect = e-104, Method: Compositional matrix adjust.
Identities = 169/245 (68%), Positives = 192/245 (78%), Gaps = 14/245 (5%)
Query: 1 MSQQRQLGMVGGRNNGSQLIDTTYTKIFVGGLAWETKRDTMRHYFEQFGEIQEAVVITDK 60
MSQQRQ MVGG NN Q DTT+TKIFVGGLAWET+R+TMR YFEQFGEIQEAVVITDK
Sbjct: 1 MSQQRQFQMVGG-NNAGQFGDTTFTKIFVGGLAWETQRETMRRYFEQFGEIQEAVVITDK 59
Query: 61 NTGRSKGYGFVTFKDPDAAIRACQDPSPVIDGRRANCNLACLGANRSYPSSTPQPGNGRF 120
NTG+SKGYGFVTFKDPDAA+RACQDPSPVIDGRRANCNLA LGA+R++P ST Q G GRF
Sbjct: 60 NTGKSKGYGFVTFKDPDAAMRACQDPSPVIDGRRANCNLASLGAHRNHP-STYQHGMGRF 118
Query: 121 KPTLGSI--PSTYEGSSSYFHQQTP-YTFPYSTYGYTGYSQENMYQMNYYNVY--GGQQL 175
+P GS+ P+ + SS+YFHQ T Y+FPYS YGY+GYSQEN Y MNYY+VY GGQQ
Sbjct: 119 RPARGSVALPAYHGTSSTYFHQPTAQYSFPYSAYGYSGYSQENTYPMNYYSVYGGGGQQF 178
Query: 176 SPYYTAASGAPG--GVFPNYYPYYLQ---GNNGQGLRVQYPQWVQYPYLSQPY--TPPIL 228
SPYY A + +PG G+F N+YP+Y Q N QG +QYPQ VQYPYL Q Y +L
Sbjct: 179 SPYYAATAASPGAPGIFHNFYPFYAQYIHSNQSQGFGIQYPQMVQYPYLPQHYGGAGGVL 238
Query: 229 PIPTS 233
IPTS
Sbjct: 239 SIPTS 243