BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000102.1_g1200.1
(245 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002865522.1 hypothetical protein ARALYDRAFT_917523 [Arabidops... 74 9e-12
XP_006285450.1 hypothetical protein CARUB_v10006875mg, partial [... 71 9e-11
XP_006418776.1 hypothetical protein EUTSA_v10003059mg, partial [... 66 3e-10
>XP_002865522.1 hypothetical protein ARALYDRAFT_917523 [Arabidopsis lyrata subsp.
lyrata] EFH41781.1 hypothetical protein
ARALYDRAFT_917523 [Arabidopsis lyrata subsp. lyrata]
Length = 352
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 14/156 (8%)
Query: 63 KIKGTTTSSSTKKIIIANNNQMNWVPPEAPFIKINVDASFTSLSEPVGIGCIMHDDKADH 122
K++G +S S+K W PE ++K N DAS ++ G+G I+ D
Sbjct: 179 KLQGVRSSRSSK-----------WCKPERGYVKCNFDASHYEGNQSSGLGRIIRDSNGTC 227
Query: 123 IAALADTTRG-QIAEECECQAIMWAMQWAAELKIQHIHIESDNLNLIRYLHNNNTSIQWK 181
+ +G Q EE EC A++WA+Q + L +H+ E DN N++ + N I +
Sbjct: 228 LDCGMGKFQGRQTIEEAECSALIWAIQASWALGYRHVEFEGDNANIVNLI--NEGGINLR 285
Query: 182 SGKYMDIISILRDKFESIVFTHTSRQNNKQTDKQAK 217
YM+ I R+ F SI FT R+ N D A+
Sbjct: 286 LKHYMEEIWQWRNMFNSIKFTFRHREQNGCADLLAR 321
>XP_006285450.1 hypothetical protein CARUB_v10006875mg, partial [Capsella rubella]
EOA18348.1 hypothetical protein CARUB_v10006875mg,
partial [Capsella rubella]
Length = 438
Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 68 TTSSSTKKIIIANNNQMNWVPPEAPFIKINVDASFTSLSEPVGIGCIMHDDKADHIAALA 127
TT++S A + W PP ++K N DAS + G+G I+HD +
Sbjct: 259 TTTTSKPLSYHAPTRRSKWTPPCQGWVKCNYDASHHEGNRDSGLGWIIHDSHGTFLHGGM 318
Query: 128 DTTRGQI-AEECECQAIMWAMQWAAELKIQHIHIESDNLNLIRYLHNNNTSIQWKSGKYM 186
+G+ A E EC A++WA+Q + L + I E D+ L R LH+ + + ++ Y+
Sbjct: 319 GRFQGRYTAAEAECSALLWALQSSWALGYRSIVFEGDSQTLHRALHSQTNNPRLRN--YV 376
Query: 187 DIISILRDKFESIVFTHTSRQNNKQTDKQAK 217
+ I + F SI+FT R+ N DK AK
Sbjct: 377 NTILQWKPMFSSILFTFQFREQNSCADKLAK 407
>XP_006418776.1 hypothetical protein EUTSA_v10003059mg, partial [Eutrema
salsugineum] ESQ37212.1 hypothetical protein
EUTSA_v10003059mg, partial [Eutrema salsugineum]
Length = 135
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
Query: 86 WVPPEAPFIKINVDASFTSLSEPVGIGCIMHDDKADHIAALADTTRGQIA-EECECQAIM 144
W P +K N DAS + G+G I+ + + A +G+ + EE EC A++
Sbjct: 8 WRAPSNGLVKCNYDASHHRGNNDSGLGWIIRNCNGTFLDAGMGKFQGRHSPEESECSALI 67
Query: 145 WAMQWAAELKIQHIHIESDNLNLIRYLHNNNTSIQWKSGKYMDIISILRDKFESIVFTHT 204
WA+Q A L + + E DNL +I L NNN S + + Y+ +I R F++I FTH
Sbjct: 68 WALQSAWSLGYRKVEFEGDNL-IINQLINNNRSNE-RLYHYLRLIHNWRSMFDTIKFTHR 125
Query: 205 SR-QNNKQT 212
R NN QT
Sbjct: 126 RRDSNNAQT 134