BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0030.1
(306 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010435962.1 PREDICTED: uncharacterized protein LOC104719693 [... 301 2e-92
XP_010463164.1 PREDICTED: uncharacterized protein LOC104743817 [... 296 3e-89
XP_009111771.1 PREDICTED: putative ribonuclease H protein At1g65... 288 5e-89
>XP_010435962.1 PREDICTED: uncharacterized protein LOC104719693 [Camelina sativa]
Length = 845
Score = 301 bits (770), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 143/298 (47%), Positives = 197/298 (66%), Gaps = 1/298 (0%)
Query: 5 ESVRNYHRADGVDRSIVKIDLRKAYDTVRWSSLMKVLKKFNLPPLFIKWIEECVTHPSYS 64
E V++YH+ D RS VKID+ KA+D+V+WS ++ + K + P FIKWIE C+T S+S
Sbjct: 204 EIVKDYHKDDISPRSAVKIDISKAFDSVQWSFILSIFKALDFPSQFIKWIELCITTASFS 263
Query: 65 IVVNGGAHGYFKGKRGLRQGCPISPYLFVMVMEVFSSLIAKVEEEGSFHLHPKCKNPKVT 124
+ VNG G FK RGLRQGC +SPYLFV M+V S+L+ K ++ HPKC N ++T
Sbjct: 264 VQVNGELSGLFKSARGLRQGCSLSPYLFVTCMQVLSALLDKAAKDKQIGYHPKCHNLQLT 323
Query: 125 HLCFADDLMVFMRGDESSVVTLRSVLDRFYMGTGLAANTMKSTVFWAG-GEDDGFLVRSI 183
HLCFADDL+VF G ++S+ + ++ D+F +GL + KST++ AG EDD + S
Sbjct: 324 HLCFADDLLVFTDGTKTSIEGILTIFDKFADYSGLKISLEKSTLYMAGVKEDDQADILSS 383
Query: 184 LGFEKGELPIKYLGLPLISSRLSYSDCVPLINKIRARIQSWKARYLSFAGRVLLIKVVLN 243
F G LP++YLGLPL++ R++ D PLI +I+ RI W AR+LSFAGR+ LI VL+
Sbjct: 384 FPFANGSLPVRYLGLPLLTKRMTTQDYAPLIARIKDRISCWSARHLSFAGRLQLIASVLH 443
Query: 244 SMIIYWTSVFMFPKRVYKEINSLFSRFLWTGLQLEARKVSIRWAIVCLPVEEGGLGIR 301
S+I +W S F P EI+SL S FLW+G L +K + W VC+P EEGGLG+R
Sbjct: 444 SLINFWMSAFRLPNACISEIDSLCSAFLWSGPTLNTKKAKVAWKDVCIPREEGGLGLR 501
>XP_010463164.1 PREDICTED: uncharacterized protein LOC104743817 [Camelina sativa]
Length = 1039
Score = 296 bits (757), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 196/302 (64%), Gaps = 1/302 (0%)
Query: 1 MLAHESVRNYHRADGVDRSIVKIDLRKAYDTVRWSSLMKVLKKFNLPPLFIKWIEECVTH 60
+LA E V++YH+ R ++KID+ KA+D+V+W L+ +LK N+P FI WIE C+
Sbjct: 387 LLASELVKDYHKESISPRCMMKIDISKAFDSVQWPFLINILKAINVPANFIHWIELCICS 446
Query: 61 PSYSIVVNGGAHGYFKGKRGLRQGCPISPYLFVMVMEVFSSLIAKVEEEGSFHLHPKCKN 120
S+S+ VNG GYF+ KRGLRQGC +SPYLFV+ M V S ++ K + HP+CK
Sbjct: 447 ASFSVQVNGELAGYFQSKRGLRQGCSLSPYLFVICMNVLSLMLDKAATDQFIGYHPRCKT 506
Query: 121 PKVTHLCFADDLMVFMRGDESSVVTLRSVLDRFYMGTGLAANTMKSTVFWAG-GEDDGFL 179
+THLCFADD+++F G S+V +V DRF +GL N KS++F AG
Sbjct: 507 MNLTHLCFADDILIFTDGSSHSIVATLAVFDRFAAVSGLRINLQKSSLFMAGFSTQHQHD 566
Query: 180 VRSILGFEKGELPIKYLGLPLISSRLSYSDCVPLINKIRARIQSWKARYLSFAGRVLLIK 239
+ F G LP++YLGLPL++ ++++D +PL+ +IR+RI W R+LSFAGR+ LIK
Sbjct: 567 ILQHFQFSVGSLPVRYLGLPLLTRSMTHADYLPLLERIRSRISCWTGRFLSFAGRLQLIK 626
Query: 240 VVLNSMIIYWTSVFMFPKRVYKEINSLFSRFLWTGLQLEARKVSIRWAIVCLPVEEGGLG 299
VL+S+ +W S F PKR +EI+SLFS FLW+G L +K I W VC P+ EGGLG
Sbjct: 627 SVLSSLTTFWFSAFRLPKRCLQEIDSLFSAFLWSGPALNTKKARISWLDVCKPMHEGGLG 686
Query: 300 IR 301
+R
Sbjct: 687 LR 688
>XP_009111771.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 668
Score = 288 bits (736), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 141/302 (46%), Positives = 191/302 (63%), Gaps = 1/302 (0%)
Query: 1 MLAHESVRNYHRADGVDRSIVKIDLRKAYDTVRWSSLMKVLKKFNLPPLFIKWIEECVTH 60
+LA E V++YHR D R ++ID+ KA+D+V+W L+ L+ P FI+WI C+T
Sbjct: 23 LLASELVKDYHREDISLRCAMQIDIAKAFDSVQWPFLLNTLQAMGFPGKFIQWISLCITS 82
Query: 61 PSYSIVVNGGAHGYFKGKRGLRQGCPISPYLFVMVMEVFSSLIAKVEEEGSFHLHPKCKN 120
PS+S+ VNG GYF+ KRGLRQGC +SP LFV+ M V S +I + G HPKCKN
Sbjct: 83 PSFSVQVNGELAGYFQSKRGLRQGCSLSPCLFVICMSVLSRMIDEAAGRGEIGYHPKCKN 142
Query: 121 PKVTHLCFADDLMVFMRGDESSVVTLRSVLDRFYMGTGLAANTMKSTVFWAGGEDDGF-L 179
+THLCFADDLMVF G S+ + +V DRF +GL + KS +F AGG D
Sbjct: 143 IDITHLCFADDLMVFTDGTRKSIEGILTVFDRFDRMSGLQISMEKSILFMAGGTDQKREE 202
Query: 180 VRSILGFEKGELPIKYLGLPLISSRLSYSDCVPLINKIRARIQSWKARYLSFAGRVLLIK 239
V++ F G LP++YLGLPL++ R++ +D +PLI KIR RI SW R+LS+AGR LI+
Sbjct: 203 VQNQFQFASGTLPVRYLGLPLLTKRMTVNDYLPLIEKIRKRISSWTGRFLSYAGRSQLIQ 262
Query: 240 VVLNSMIIYWTSVFMFPKRVYKEINSLFSRFLWTGLQLEARKVSIRWAIVCLPVEEGGLG 299
V+ S+ +W + F P KEI + S +LW+G +L RK I W +C +EGGLG
Sbjct: 263 SVIMSLTNFWMAAFRLPSSCIKEIERICSAYLWSGPELNGRKNKIAWKDICKTKQEGGLG 322
Query: 300 IR 301
IR
Sbjct: 323 IR 324