BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0380.1
(505 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009118133.1 PREDICTED: uncharacterized protein LOC103843180 [... 149 1e-34
XP_009129000.1 PREDICTED: putative ribonuclease H protein At1g65... 142 7e-34
XP_010068015.1 PREDICTED: uncharacterized protein LOC104454827 [... 145 1e-33
>XP_009118133.1 PREDICTED: uncharacterized protein LOC103843180 [Brassica rapa]
Length = 1615
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 5/241 (2%)
Query: 1 MVLFWLSVFA-PMRVLREIDHMLSRFLWSGAGDEVRRAALGWTKVCFPMSEGGLGIRNVD 59
++ FW+S F P + I+ + SRFLWSG D+ A + WT VC P EGGLG+R+++
Sbjct: 1314 LINFWVSAFMLPKGCIAAIESLCSRFLWSGNIDKKGIAKIAWTTVCLPKKEGGLGLRSIN 1373
Query: 60 ILNIACCLRHIWDLFSNKDTLWVNWVQTNLIKKRDFWLMDVPNMASWVWRRLLQFRKYGL 119
+ N LR +W L SN +LWV+W ++ + FW ++ + SW W+RLL+ R L
Sbjct: 1374 VWNQVLGLRFVWLLLSNAPSLWVDWHKSFHLTGNSFWTIEPSSSDSWAWKRLLKLRPLAL 1433
Query: 120 LFACHVIGNGQSTRFWKDNWHPMGLLNEGFSNIFRYNSRLHADAKVSSCISNGQWLLPWE 179
F V+GNG STRFW D W P G L RL +A V+ + W LP
Sbjct: 1434 QFCNSVVGNGVSTRFWLDVWTPFGQLINHLGPGGPRALRLRKEATVADATNGANWSLPHP 1493
Query: 180 FAEFLEPFAARISEVS--IDEEYEDIKVWKASDS--GVFTLKDTYNGMGLKVAGVPWHGL 235
++ + ++ +S + + +D WKA+DS VFT + T+ + + PWH +
Sbjct: 1494 RSDQEVELHSYLTTLSLPLPTDIDDCFEWKAADSPMNVFTSQATWEVLRPRQPIQPWHDI 1553
Query: 236 V 236
V
Sbjct: 1554 V 1554
>XP_009129000.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 423
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 119/225 (52%), Gaps = 5/225 (2%)
Query: 4 FWLSVFA-PMRVLREIDHMLSRFLWSGAGDEVRRAALGWTKVCFPMSEGGLGIRNVDILN 62
FW S + P ++ I+ + ++FLWSG D+ A +GWT +C P EGGLGIR++ + N
Sbjct: 28 FWASAYMLPKGCVKAIESLCAKFLWSGNIDKKAIAKIGWTTICLPKQEGGLGIRSLTVWN 87
Query: 63 IACCLRHIWDLFSNKDTLWVNWVQTNLIKKRDFWLMDVPNMASWVWRRLLQFRKYGLLFA 122
CL+ IW L ++ +LW +W ++ + FW + + SW W+RLL+ R F
Sbjct: 88 KVQCLKFIWILLTSSTSLWADWHRSVHLSTSSFWTLSIDQADSWAWKRLLKLRPLAAQFC 147
Query: 123 CHVIGNGQSTRFWKDNWHPMGLLNEGFSNIFRYNSRLHADAKVSSCISNGQWLLPWEFAE 182
++GNGQ+T FW D W P+G L + RLH DAKV+ I N W LP ++
Sbjct: 148 RSLVGNGQTTSFWWDVWTPLGQLIDFIGPSGPRALRLHQDAKVADAIHNTGWTLPHPRSQ 207
Query: 183 FLEPFAARISEVS--IDEEYEDIKVWKASDS--GVFTLKDTYNGM 223
A ++ ++ + +D +W A +S VF+ T+ M
Sbjct: 208 REVELHAHLTTITLPLPNNIDDSYIWVAGNSPLTVFSSAATWEVM 252
>XP_010068015.1 PREDICTED: uncharacterized protein LOC104454827 [Eucalyptus grandis]
Length = 1284
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 4 FWLSVFA-PMRVLREIDHMLSRFLWSGAGDEVRRAALGWTKVCFPMSEGGLGIRNVDILN 62
+W SVF P+ V+ +I+ + +FLW G A + W +VC P EGGLGIR + N
Sbjct: 1027 YWASVFVLPIVVMEQIEKIFRQFLWKGPDLGRGGAKVAWDEVCLPKDEGGLGIRRLQDCN 1086
Query: 63 IACCLRHIWDLFSNKDTLWVNWVQTNLIKKRDFWLMDVPNMASWVWRRLLQFRKYGLLFA 122
A L+HIW LFS+K+ LW WV + +K ++FW+ P SW W+ LL R+ +
Sbjct: 1087 KAAMLKHIWLLFSDKEALWCRWVHSTFLKNKNFWVARKPTSGSWAWKSLLILRRDFRMAF 1146
Query: 123 CHVIGNGQSTRFWKDNWHPMGLLNEGFSNIFRYNSRLHADAKVSSCISNGQWLLPWEFAE 182
IG+GQ+T W DNWHP G LN FS+ Y+S L A ++ S+ L
Sbjct: 1147 YWKIGDGQTTSLWFDNWHPRGPLNLIFSDSLIYSSGLFRQACIADLFSDAGQALRLVLET 1206
Query: 183 FLEPFAARISEVSIDEEYEDIKVWKASDSGVFTLKDTYNGMGLKVAGVPWHGLVIKRFWE 242
+ P + I D W+ S SG FT+ +N + K V W+ + W+
Sbjct: 1207 WGHP-------LPILTSVSDRCCWRESSSGQFTMASAWNFIRKKRTRVHWYSFI----WD 1255
Query: 243 EEVV 246
+V
Sbjct: 1256 NAIV 1259