BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0410.1
(616 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAC13599.1 similar to reverse transcriptase (Pfam: transcript_fa... 412 e-130
XP_013746189.1 PREDICTED: uncharacterized protein LOC106448916 [... 423 e-129
XP_013601835.1 PREDICTED: uncharacterized protein LOC106309348 [... 418 e-128
>AAC13599.1 similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 412 bits (1060), Expect = e-130, Method: Compositional matrix adjust.
Identities = 205/511 (40%), Positives = 313/511 (61%), Gaps = 3/511 (0%)
Query: 89 TFRALVADVRLQGDPANPVLRRQERVATENYSNVVRTETAMLRQRAKVEWLTLDDSNTAY 148
F L ++ +P ++E A + ++ E L+QR+K+ WL + D N
Sbjct: 204 AFETLCQKQAMKMANPSPSSMQEENEAYAKWDHIAVLEEKFLKQRSKLHWLDIGDRNNKA 263
Query: 149 FHNSIKKRNARNTITRLIREDGSVAEDLVEIANMCVDFYRDLFGRDDEDNEALDHISNVQ 208
FH ++ R A+N+I +I DGSVA +I +R+ D E + + +Q
Sbjct: 264 FHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEHHFREFLQLIPNDFEGIA-VEELQ 322
Query: 209 SSRPL--TEAERALLTLRVTRDEIYAALQTIGSDRSPGPDGLSSHFFKACWSIVGDDFVE 266
P +++++ +LT V+ +EI+ + ++ +D+SPGPDG ++ F+K W+I+G +F+
Sbjct: 323 DLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKSPGPDGYTAEFYKGAWNIIGAEFIL 382
Query: 267 AIQNFFSSGKLLKEVNSTFVTLFPKIDNASSVSDFRPISCCNVLYKCIIKILTIRLKGVI 326
AIQ+FF+ G L K +NST + L PK A + D+RPISCCNVLYK I KI+ RLK V+
Sbjct: 383 AIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISKIIANRLKLVL 442
Query: 327 YSMISPNQSAFISGRTIQDNIMLAHEIVRNYHRPTGPTRCTVKIDLKKAYDTVRWSSLFS 386
I NQSAF+ R + +N++LA EIV++YH+ + +RC +KID+ KA+D+V+W L +
Sbjct: 443 PKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAFDSVQWKFLIN 502
Query: 387 VLGNFHFPRIFTKWIRACVTTSKFSILVNGEAHGYFDGKRGLQQGCPISPYLFVLMMEVF 446
VL +FP FT WI C+TT+ FS+ VNGE G F R L+QGC +SPYLFV+ M+V
Sbjct: 503 VLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSPYLFVISMDVL 562
Query: 447 AVLIDREERAGRFLLHPQCLVPKVTHLCFADDLMVFFRGDTGSAQALKGVLTGFHRATGL 506
+ ++D+ A +F HP+C +THL FADDLM+ G S + VL F + +GL
Sbjct: 563 SKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKWSGL 622
Query: 507 QANVLKSTIFFAGLSAQGQSDITTILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDKIK 566
+ ++ KST++ AG+ A +I F G LP+RYLGLPL+S RLT S C+PLI++++
Sbjct: 623 KISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLR 682
Query: 567 GRIQSWKSRFLSFARRVLLIKVVLNNMLLYW 597
+I++W SRFLSFA R+ LI L ++ +W
Sbjct: 683 KKIEAWTSRFLSFAGRLNLISSTLWSICNFW 713
>XP_013746189.1 PREDICTED: uncharacterized protein LOC106448916 [Brassica napus]
XP_013746254.1 PREDICTED: uncharacterized protein
LOC106448993 [Brassica napus]
Length = 1451
Score = 423 bits (1088), Expect = e-129, Method: Compositional matrix adjust.
Identities = 207/490 (42%), Positives = 304/490 (62%), Gaps = 3/490 (0%)
Query: 110 RQERVATENYSNVVRTETAMLRQRAKVEWLTLDDSNTAYFHNSIKKRNARNTITRLIRED 169
++E A E + + E L+Q++K+ WL + D N FH+ +K R ARNTI ++ ED
Sbjct: 621 KKEVEAHEKWQRLAALEEEYLKQKSKLHWLDVGDGNNRVFHSVVKVREARNTIHEVLCED 680
Query: 170 GSVAEDLVEIANMCVDFYRDLFGRDDEDNEA--LDHISNVQSSRPLTEAERALLTLRVTR 227
G + + EI F+ D +D E ++ + ++ S ++A+ L VT+
Sbjct: 681 GRLVKTENEIKKEAERFFEDFMSAQPQDFEGATVEKLKDLLSFE-CSQADCDKLMKEVTK 739
Query: 228 DEIYAALQTIGSDRSPGPDGLSSHFFKACWSIVGDDFVEAIQNFFSSGKLLKEVNSTFVT 287
+EI L + ++PGPDG ++ FFK W I+GDD A+Q+FF G L K +NST ++
Sbjct: 740 EEIKGVLFKMPGSKAPGPDGYTAEFFKETWGIIGDDIAVAVQSFFVKGFLPKGLNSTILS 799
Query: 288 LFPKIDNASSVSDFRPISCCNVLYKCIIKILTIRLKGVIYSMISPNQSAFISGRTIQDNI 347
L PK A + D+RPISCCNVLYK I KIL RLK ++ IS NQSAF+ R + +N+
Sbjct: 800 LIPKKKEAKVMKDYRPISCCNVLYKLISKILASRLKKILPKCISQNQSAFVMERLLMENV 859
Query: 348 MLAHEIVRNYHRPTGPTRCTVKIDLKKAYDTVRWSSLFSVLGNFHFPRIFTKWIRACVTT 407
+LA E+V++YH+ T RC +KID+ KA+D+V+W L + L P F WI C+TT
Sbjct: 860 LLATEVVKDYHKETVSPRCAMKIDISKAFDSVQWPFLLNTLKALGLPDRFIYWISLCITT 919
Query: 408 SKFSILVNGEAHGYFDGKRGLQQGCPISPYLFVLMMEVFAVLIDREERAGRFLLHPQCLV 467
+ FS+ VNGE GYF KRGL+QGC +SPYLFV+ M V + ++D + HP+C
Sbjct: 920 ASFSVQVNGELAGYFQSKRGLRQGCSLSPYLFVICMNVLSKMLDEAATKKKIGYHPKCES 979
Query: 468 PKVTHLCFADDLMVFFRGDTGSAQALKGVLTGFHRATGLQANVLKSTIFFAGLSAQGQSD 527
++THLCFADDLMVF G GS + + V F + +GL+ ++ KST+F AG+SAQ Q +
Sbjct: 980 VELTHLCFADDLMVFADGTKGSIEGILRVFEEFDKMSGLKISMEKSTLFLAGVSAQNQEE 1039
Query: 528 ITTILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDKIKGRIQSWKSRFLSFARRVLLIK 587
I + F +G LP+RYLGLPL++ +T +PLI+KI+ RI SW +R+LS+A R+ LIK
Sbjct: 1040 IMSHFPFASGKLPVRYLGLPLLTKNMTVLDYLPLIEKIRKRIGSWTARYLSYAGRLQLIK 1099
Query: 588 VVLNNMLLYW 597
V+ ++ +W
Sbjct: 1100 SVITSLANFW 1109
>XP_013601835.1 PREDICTED: uncharacterized protein LOC106309348 [Brassica oleracea
var. oleracea]
Length = 1311
Score = 418 bits (1074), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/497 (42%), Positives = 301/497 (60%), Gaps = 6/497 (1%)
Query: 105 NPVLR--RQERVATENYSNVVRTETAMLRQRAKVEWLTLDDSNTAYFHNSIKKRNARNTI 162
NP + R E A + + E L+Q +KV WL + D N +FHNS K R RN I
Sbjct: 501 NPTMEAMRAENEANTRWQRLAELEEEFLKQCSKVHWLDVGDGNNKFFHNSAKLREIRNAI 560
Query: 163 TRLIREDGSVAEDLVEIANMCVDFYRDLFGRDDEDNE--ALDHISNVQSSRPLTEAERAL 220
+ R DGS+A+ EI F+ + + ED E ++D + + + +E +
Sbjct: 561 HEIQRADGSLAKTNEEIKVEAKSFFAEFMTKQLEDFEGVSVDRLKELLGYQ-CSEMDCRK 619
Query: 221 LTLRVTRDEIYAALQTIGSDRSPGPDGLSSHFFKACWSIVGDDFVEAIQNFFSSGKLLKE 280
L VTR+EI + + +SPGPDG +S FFK W ++GDD + AIQ+FF G L K
Sbjct: 620 LEREVTREEIKEVIFHMPGSKSPGPDGYTSEFFKKAWEVIGDDVIVAIQSFFVKGFLPKG 679
Query: 281 VNSTFVTLFPKIDNASSVSDFRPISCCNVLYKCIIKILTIRLKGVIYSMISPNQSAFISG 340
VNST + L PK + + + D+RPISCCNVLYK I KI+ RLKGV+ I+ NQSAFI
Sbjct: 680 VNSTILALIPKKEESKMMKDYRPISCCNVLYKAISKIIANRLKGVLPKFITLNQSAFIKE 739
Query: 341 RTIQDNIMLAHEIVRNYHRPTGPTRCTVKIDLKKAYDTVRWSSLFSVLGNFHFPRIFTKW 400
R + +N++LA E+V++YH+ RC +KID+ KA+D+V+WS L + L F W
Sbjct: 740 RLLMENVLLATELVKDYHQEDISARCAMKIDISKAFDSVQWSFLINTLTALGLSDKFISW 799
Query: 401 IRACVTTSKFSILVNGEAHGYFDGKRGLQQGCPISPYLFVLMMEVFAVLIDREERAGRFL 460
I CVT++ FS+ VNGE GYF KRGL+QGC +SPYLFV+ M V + ++D G+
Sbjct: 800 ISLCVTSASFSVQVNGELAGYFQSKRGLRQGCSLSPYLFVICMNVLSKMLDEAAHGGQIG 859
Query: 461 LHPQCLVPKVTHLCFADDLMVFFRGDTGSAQALKGVLTGFHRATGLQANVLKSTIFFAGL 520
HP+C +THLCFADDLMVF G S + + V F R +GL+ ++ KST+F AG
Sbjct: 860 FHPKCKNIDLTHLCFADDLMVFADGTRNSIEGILRVFDAFDRMSGLKISMEKSTLFMAG- 918
Query: 521 SAQGQSDITTILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDKIKGRIQSWKSRFLSFA 580
+ Q + +I +F TGSLP+RYLGLPL++ R+ +PLI+KI+ R+ SW RFLS+A
Sbjct: 919 NMQKREEILRDFQFATGSLPVRYLGLPLLTKRMIVLDYLPLIEKIRKRVSSWTGRFLSYA 978
Query: 581 RRVLLIKVVLNNMLLYW 597
R+ LI V+ ++ +W
Sbjct: 979 GRLQLINSVIMSLTNFW 995