BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0440.1
(622 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013639494.1 PREDICTED: uncharacterized protein LOC106344722 [... 185 5e-49
XP_013738980.1 PREDICTED: uncharacterized protein LOC106441757 [... 187 9e-47
XP_013654301.1 PREDICTED: uncharacterized protein LOC106359090 [... 178 4e-45
>XP_013639494.1 PREDICTED: uncharacterized protein LOC106344722 [Brassica oleracea
var. oleracea]
Length = 409
Score = 185 bits (470), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 141/232 (60%), Gaps = 9/232 (3%)
Query: 9 LITRVTRDEIFAALQTIGSDRSPVQDGFSSHFFKACWKIVGDDFGEAIQRFFSTEKLLKE 68
L+ VT++EI L + +SP +G++S FFK +I+GDD I F E+LL E
Sbjct: 57 LMKEVTKEEIKDVLFKMPGHKSPGPEGYTSEFFKEAGQIIGDDV--TIASAFIKERLLME 114
Query: 69 DNIMLAHEIVWNYHRQDTSARCTVKIDLKKAYDTVRWFSLFSVLGKFHFPRIFIEWVRAC 128
N++LA EIV +YHR+D +RC + ID+ KA+D+V+W L + L P FI+W+ C
Sbjct: 115 -NVLLAIEIVKDYHREDIFSRCAMMIDISKAFDSVQWIFLLNTLQALGLPAKFIKWISLC 173
Query: 129 VTTSKFSIMVNGEAHSYFDGKRGLRQGCPIYPYLFVLMMKVFAVLTDREERASRFLL--H 186
+TT+ FS+ VNGE YF RGLRQGC + PYLFVL + V + + D E ASR L+ H
Sbjct: 174 ITTASFSVQVNGELAGYFQRNRGLRQGCSLSPYLFVLCINVLSKMLD--EAASRNLIGFH 231
Query: 187 PKCRVPKATHLCFADDLMVFFRGDAGSAQSLKDTGENRRTINRWNLTIALQK 238
PKC+ THLCFADDLMVF G S + + E ++ L I+L+K
Sbjct: 232 PKCKNIGLTHLCFADDLMVFIEGSRRSVEGILRVFEEFDKMS--GLKISLEK 281
>XP_013738980.1 PREDICTED: uncharacterized protein LOC106441757 [Brassica napus]
Length = 1118
Score = 187 bits (476), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 139/252 (55%), Gaps = 20/252 (7%)
Query: 8 ILITRVTRDEIFAALQTIGSDRSPVQDGFSSHFFKACWKIVGDDFGEAIQRFFSTEKL-- 65
++ T T++EI L+ + +SP DGF+S FFK+ W IVG + +AI RFF + L
Sbjct: 392 LMSTAPTQEEIANVLKKLNPKKSPGPDGFTSAFFKSAWPIVGSEVLQAISRFFISNFLPL 451
Query: 66 ----------------LKEDNIMLAHEIVWNYHRQDTSARCTVKIDLKKAYDTVRWFSLF 109
L +N +LA EIV YHR+ R T+K+D+ KA+DTVRW LF
Sbjct: 452 STNATILTLTAFVQGRLLIENTLLASEIVQGYHRRGGQKRITIKVDIAKAFDTVRWEFLF 511
Query: 110 SVLGKFHFPRIFIEWVRACVTTSKFSIMVNGEAHSYFDGKRGLRQGCPIYPYLFVLMMKV 169
+ L ++ P I W+ ACV T FS+ NG + YF GKRGLRQG P+ PYLFVL+M
Sbjct: 512 ACLRSYNIPEALIRWLEACVCTPSFSVAFNGSTYGYFKGKRGLRQGDPLSPYLFVLVMNC 571
Query: 170 FAVLTDREERASRFLLHPKCRVPKATHLCFADDLMVFFRGDAGSAQSLKDTGENRRTINR 229
++ +R F HP+C K THL FADDL++F G S Q + G + R
Sbjct: 572 LSLALERAAATGSFQYHPRCEKTKLTHLSFADDLLIFSDGSLSSIQPI--LGVLKDFEKR 629
Query: 230 WNLTIALQKPVY 241
L I+L+K +
Sbjct: 630 SGLAISLKKTSF 641
>XP_013654301.1 PREDICTED: uncharacterized protein LOC106359090 [Brassica napus]
Length = 581
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/256 (36%), Positives = 139/256 (54%), Gaps = 40/256 (15%)
Query: 4 DQGAILITRVTRDEIFAALQTIGSDRSPVQDGFSSHFFKACWKIVGDDFGEAIQRFFS-- 61
+ G LI V+ +EI L ++ S+++P +G++ FF A W+++G DF A+Q FF
Sbjct: 309 ETGNELIRVVSAEEIQQTLHSMPSEKTPGPNGYTKGFFVAAWEVIGSDFVVAVQSFFQFG 368
Query: 62 ------------------TEKLLKE----------------DNIMLAHEIVWNYHRQDTS 87
+KLL + +N++LA EIV NYH+ S
Sbjct: 369 FMPHGVNATVISKTIAKRLKKLLHDLIQPNQSAFIQGHLLLENVLLATEIVKNYHKDSIS 428
Query: 88 ARCTVKIDLKKAYDTVRWFSLFSVLGKFHFPRIFIEWVRACVTTSKFSIMVNGEAHSYFD 147
R +KID+ KA+D VRW L ++L FP IFI W++ C++T+ FS+ VNGE +F
Sbjct: 429 PRAALKIDITKAFDIVRWDFLLNILKALRFPEIFINWIKGCISTAAFSVNVNGELEGFFT 488
Query: 148 GKRGLRQGCPIYPYLFVLMMKVFAVLTDREERASRFLLHPKCRVPKATHLCFADDLMVFF 207
RGLRQGC + P LFV+++ V ++ R RF HPKC+ + THL FADDL +F
Sbjct: 489 SSRGLRQGCSLSPILFVIIINVLTHRLNKATRMGRFGYHPKCQEVELTHLSFADDLFIFT 548
Query: 208 RGD----AGSAQSLKD 219
G AG+ + LK+
Sbjct: 549 DGSERSLAGTVEVLKE 564