BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0620.1
(168 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABD78178.1 NADH dehydrogenase subunit 5, partial (mitochondrion)... 320 e-108
ABD78271.1 NADH dehydrogenase subunit 5, partial (mitochondrion)... 318 e-107
AAW47304.1 NADH dehydrogenase subunit 5, partial (mitochondrion)... 320 e-106
>ABD78178.1 NADH dehydrogenase subunit 5, partial (mitochondrion) [Dicentra sp.
Qiu 95026]
Length = 358
Score = 320 bits (820), Expect = e-108, Method: Compositional matrix adjust.
Identities = 157/159 (98%), Positives = 158/159 (99%)
Query: 1 MRLNAITLICILLLIGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATTITAGVFMIARC 60
MRLNAITLICILLLIGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATT+TAGVFMIARC
Sbjct: 113 MRLNAITLICILLLIGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATTVTAGVFMIARC 172
Query: 61 SPLFEYPPTALIVITSAGATMSFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS 120
SPLFEYPPTALIVITSAGAT SFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS
Sbjct: 173 SPLFEYPPTALIVITSAGATTSFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS 232
Query: 121 VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGL 159
VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGL
Sbjct: 233 VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGL 271
>ABD78271.1 NADH dehydrogenase subunit 5, partial (mitochondrion) [Petrophile
canescens]
Length = 355
Score = 318 bits (814), Expect = e-107, Method: Compositional matrix adjust.
Identities = 156/163 (95%), Positives = 157/163 (96%)
Query: 1 MRLNAITLICILLLIGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATTITAGVFMIARC 60
MRLNAITLICILL IGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAAT +TAGVFMIARC
Sbjct: 113 MRLNAITLICILLFIGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATMVTAGVFMIARC 172
Query: 61 SPLFEYPPTALIVITSAGATMSFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS 120
SPLFEYPPTALIVITSAGAT SFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS
Sbjct: 173 SPLFEYPPTALIVITSAGATTSFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS 232
Query: 121 VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLPPRF 163
VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGL F
Sbjct: 233 VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSF 275
>AAW47304.1 NADH dehydrogenase subunit 5, partial (mitochondrion) [Platanus
occidentalis]
Length = 452
Score = 320 bits (821), Expect = e-106, Method: Compositional matrix adjust.
Identities = 157/163 (96%), Positives = 158/163 (96%)
Query: 1 MRLNAITLICILLLIGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATTITAGVFMIARC 60
MRLNAITLICILL IGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATT+TAGVFMIARC
Sbjct: 190 MRLNAITLICILLFIGAAGKSAQIGSHTWSPDAMEGPTPVSASIHAATTVTAGVFMIARC 249
Query: 61 SPLFEYPPTALIVITSAGATMSFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS 120
SPLFEYPPTALIVITSAGAT SFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS
Sbjct: 250 SPLFEYPPTALIVITSAGATTSFLAATTGILQNDPKRVIAYSTCSQLGYMIFACGISNYS 309
Query: 121 VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLPPRF 163
VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGL F
Sbjct: 310 VSVFHLMNHAFFKALLFLSAGSVIHAMSDEQDMRKMGGLASSF 352