BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0710.1
(545 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013749866.1 PREDICTED: uncharacterized protein LOC106452330 i... 234 4e-65
XP_010046135.1 PREDICTED: uncharacterized protein LOC104434998 [... 232 2e-64
XP_009122912.1 PREDICTED: putative ribonuclease H protein At1g65... 231 2e-64
>XP_013749866.1 PREDICTED: uncharacterized protein LOC106452330 isoform X1
[Brassica napus]
Length = 714
Score = 234 bits (596), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/475 (31%), Positives = 230/475 (48%), Gaps = 46/475 (9%)
Query: 16 NVLKSTIFFAGLSAQGQSDITTILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDKIKGR 75
N K+ + G SA ++ + GSLP+RYLG+PL ++T S PL+DKI R
Sbjct: 224 NRSKTELLLDGGSASRCREMAEQMGIAQGSLPVRYLGVPLSPKKMTSSDFQPLLDKISAR 283
Query: 76 IQSWKSRFLSFAGRVLLIKVVLNSMLLYWAAVFVIPKRVMKDINSIFSKFLWSGADMGCK 135
SW + LSFAGR LI+ V+ S + +WA++F+IP ++ + + FLW+GA +
Sbjct: 284 FNSWTVKHLSFAGRFQLIQAVIYSTISFWASIFIIPNECIRILERMCGAFLWNGAPNSAR 343
Query: 136 RAPIGWENLCYPTDEGGL-----------LGFRNIEMLFEAS------------------ 166
A I WE++C P + GGL LG + I +LF A
Sbjct: 344 GAKIAWESVCTPKEAGGLGLKRLADWNVVLGLKLIWLLFAAGGSLWVSWVRRNLIGRENF 403
Query: 167 -----NLRH--IWDLVSASRPTAQRLICTSLGDGHNTKFWTDLWHPRGLLLDAFEETHRY 219
N R IW + RP A+ I +G G FW D W G L++ E
Sbjct: 404 WMLVPNRRGSWIWRSLCKLRPKARPFIKCQVGSGITASFWMDDWTSLGPLIEVVGERGPV 463
Query: 220 DSHLNLDARVSQFIGQSGWVF----PTHVAAMLGTITVEAREVVVDSTLRDEVIWMPS-Q 274
+ L+++ARV + GW F + ML ++ + +++S + D +W+ S
Sbjct: 464 VTGLSINARVVDALTSDGWCFERSRSRSPSIMLLRDSMPDAQPILNSEVDDTYVWVTSGH 523
Query: 275 NGE--FTLKETYEAIRPRGTRLSWTSLVWSPGGIPKHCFITWLAFRRRLKTRSLLASWGM 332
NG F+ ET++ + P + W ++W G IPKH F++W+A R R+ TR L WG+
Sbjct: 524 NGSETFSTSETWKRLFPCMLEVFWHEVIWFSGRIPKHAFLSWVAARDRMVTRDRLLRWGL 583
Query: 333 VIDTTCVFCGGDEETDFHLFFGCSVTKIIWESLLLKMGFQRVCAADWEGELQWCINHFGG 392
++ TCV C G E HLFF C+ +K +W ++ +E L+W N
Sbjct: 584 LVPATCVLCVGHNEDRQHLFFDCNFSKQVWTFFTSRLRLDPPVL--FEDGLRWLKNPARE 641
Query: 393 LSIAARVGRLLLNAYVYHIWKERNNRVFRSNVMSPGLIIYTICDEVRITLNTVTK 447
++ V RLL A +Y IWKERN+R+ SP II + +R+ L+ + +
Sbjct: 642 KNVKLIV-RLLHQACLYIIWKERNSRIHTDEARSPEAIIAEVKQIIRLRLDPLAR 695
>XP_010046135.1 PREDICTED: uncharacterized protein LOC104434998 [Eucalyptus
grandis]
Length = 705
Score = 232 bits (591), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 231/489 (47%), Gaps = 53/489 (10%)
Query: 16 NVLKSTIFFAGLSAQGQSDITTILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDKIKGR 75
N KS ++ AG S ++ I L F G L RYLG+P+I+SR++ + C L+++I R
Sbjct: 214 NTNKSEVYLAGGSPSLRNQILRTLGFLEGRLSARYLGVPIITSRISKADCCVLVNRITAR 273
Query: 76 IQSWKSRFLSFAGRVLLIKVVLNSMLLYWAAVFVIPKRVMKDINSIFSKFLWSGADMGCK 135
IQSW RFLSFAGR+ LI+ VL+++ YWA+VF++P V+ I I +FLW G ++G
Sbjct: 274 IQSWTHRFLSFAGRLQLIRSVLHAIQAYWASVFILPAAVLDQIERILRQFLWKGPELGRG 333
Query: 136 RAPIGWENLCYPTDEGGLLGFRNIEMLFEASNLRHIWDLVS------------------- 176
A + WE++C P DEGG LG R + +A+ L+HIW L +
Sbjct: 334 GAKVSWEDVCCPKDEGG-LGIRRLREYNKAAMLKHIWILFADKESLWCKWIHSTFLRRVN 392
Query: 177 ---ASRPTA----------QRLICTS-----LGDGHNTKFWTDLWHPRGLLLDAFEETHR 218
A +PT R C S +G+G + W D WHPRG L F ++
Sbjct: 393 FWVAKKPTCCSWAWKKILQLRTECRSSFYWRIGNGCSVSLWFDNWHPRGPLNLYFSDSAI 452
Query: 219 YDSHLNLDARVSQFIGQSGWVFPTHVAAMLGTITVEAREVVVDSTLRDEVIWMPSQNGEF 278
Y S L A V+ G A + G + A + S D W + + F
Sbjct: 453 YASGLPRQATVTDLFTNCG-------AMIKGVLDSWADPLPTLSHSSDRFGWKGNTSHLF 505
Query: 279 TLKETYEAIRPRGTRLSWTSLVWSPGGIPKHCFITWLAFRRRLKTRSLLASWGMVIDTTC 338
T+ ++ IR R T +SW + +W+ ++ F WL + RL T++LL S+G + C
Sbjct: 506 TVASAWDLIRRRKTWVSWHTFIWNNSITSRYQFNLWLIAKCRLPTQALLLSYGRIDSALC 565
Query: 339 VFCGGDEETDFHLFFGCSVTKII---WESLLLKMGFQRVCAADWEGELQWCINHFGGLSI 395
FC ++ HLFFGC ++ I W S + ++ W L W G
Sbjct: 566 PFCNEVPDSIDHLFFGCRISASIAFFWAS-RCNLSWRN---NSWVENLNWAATFLMGKDF 621
Query: 396 AARVGRLLLNAYVYHIWKERNNRVFRSNVMSPGLIIYTICDEVRITLNTVTKRFEDTEEN 455
+ R A Y+IWK RN+ +FR +S + + VR T + +DT N
Sbjct: 622 YKCIARFSFGALCYYIWKHRNSILFREQSLSVPEVKNQLIKVVRDKATTY-RNVDDTYRN 680
Query: 456 RRTIDRWNL 464
RR W +
Sbjct: 681 RRLQRSWGI 689
>XP_009122912.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 660
Score = 231 bits (588), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 223/479 (46%), Gaps = 46/479 (9%)
Query: 16 NVLKSTIFFAGLSAQGQSDITTILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDKIKGR 75
N+ K+++F G + T GSLP++YLGLPL S RL PL+DK++ R
Sbjct: 160 NLRKTSVFLDGNDRVAAQSVATDFGLTQGSLPVKYLGLPLSSRRLGRIGYQPLLDKVRQR 219
Query: 76 IQSWKSRFLSFAGRVLLIKVVLNSMLLYWAAVFVIPKRVMKDINSIFSKFLWSGADMGCK 135
I SW +R LSFAGR+ L++ V+ S++ +WAAVF +P+ ++++ + + FLWSGA K
Sbjct: 220 ISSWTARHLSFAGRLQLLQSVIYSIINFWAAVFPLPQGCLEELERMCNAFLWSGAPNSAK 279
Query: 136 RAPIGWENLCYPTDEGGLLGFRNIEMLFEASNLRHIWDLVSAS----------------- 178
A + W+++C P + GGL G + + L E ++ IW L S
Sbjct: 280 GAKVSWDSVCTPKESGGL-GLKRLVGLNELYGVKLIWKLFEGSDSLWVAWIKSHLMEGKM 338
Query: 179 --------------------RPTAQRLICTSLGDGHNTKFWTDLWHPRGLLLDAFEETHR 218
R TA+ I ++ G FW D W G LL
Sbjct: 339 FWVSDFANKGSWIWRNLMKLRETARPFILCNVLSGEEASFWHDNWTHNGDLLSVTGTLGP 398
Query: 219 YDSHLNLDARVSQFIGQSGWVFPTHVAAMLGTI--TVEAREVVVDSTLRDEVIW---MPS 273
S +++DA V + +SGW L + + A+ +DS D +W + +
Sbjct: 399 QYSGISIDASVHSVVTESGWNVSRSRNPTLTALRAALPAQTPDIDSVEVDYFVWRNSVSA 458
Query: 274 QNGEFTLKETYEAIRPRGTRLSWTSLVWSPGGIPKHCFITWLAFRRRLKTRSLLASWGMV 333
Q F+ ++ + P ++W S+VW IPKH FI WL R R+ TR L WG+
Sbjct: 459 QPSNFSTTTLWKTLHPDPPVVNWVSIVWFKNRIPKHAFIAWLVMRNRMSTRDKLRHWGLH 518
Query: 334 IDTTCVFCGGDEETDFHLFFGCSVTKIIWESLLLKMGFQRVCAADWEGELQWCINHFGGL 393
+ C+ CG +ET HLFF C ++ +W L+ G V + E + W + G
Sbjct: 519 VPAECLLCGAADETTSHLFFECPFSQEVWSGLMAGTGL--VLSYKLEDMVVWFQSILGDS 576
Query: 394 SIAARVGRLLLNAYVYHIWKERNNRVFRSNVMSPGLIIYTICDEVRITLNTVTKRFEDT 452
V + + A +Y +WKERN R+ + P +I I ++R L + + + +
Sbjct: 577 KFKTIV-KFIFQAVIYFVWKERNGRLHSNGQKQPIFVIKEIRLQIRAKLLGMDREIDSS 634