BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0770.1
(625 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013738980.1 PREDICTED: uncharacterized protein LOC106441757 [... 398 e-122
XP_009103574.1 PREDICTED: putative ribonuclease H protein At1g65... 362 e-113
XP_009139319.1 PREDICTED: uncharacterized protein LOC103863313 [... 369 e-111
>XP_013738980.1 PREDICTED: uncharacterized protein LOC106441757 [Brassica napus]
Length = 1118
Score = 398 bits (1023), Expect = e-122, Method: Compositional matrix adjust.
Identities = 227/640 (35%), Positives = 328/640 (51%), Gaps = 65/640 (10%)
Query: 17 LLITRVTRDEIFVALQTIGSDQSPGPDGFSSHFFKACWDIVGDDFVEAIQRFF--NL--- 71
L+ T T++EI L+ + +SPGPDGF+S FFK+ W IVG + ++AI RFF N
Sbjct: 392 LMSTAPTQEEIANVLKKLNPKKSPGPDGFTSAFFKSAWPIVGSEVLQAISRFFISNFLPL 451
Query: 72 --------------GKLLKEDNIMLAHEIVRDYHRPDTSARCTVKIDLKKAYDTVRWSSL 117
G+LL E N +LA EIV+ YHR R T+K+D+ KA+DTVRW L
Sbjct: 452 STNATILTLTAFVQGRLLIE-NTLLASEIVQGYHRRGGQKRITIKVDIAKAFDTVRWEFL 510
Query: 118 FSVLGKFHFPRIFIEWLRACVTTYKFSIMVNGEAHGYFDGKRGLRQGCPISPYLFVLMME 177
F+ L ++ P I WL ACV T FS+ NG +GYF GKRGLRQG P+SPYLFVL+M
Sbjct: 511 FACLRSYNIPEALIRWLEACVCTPSFSVAFNGSTYGYFKGKRGLRQGDPLSPYLFVLVMN 570
Query: 178 VFVVLIDREERAGRFLLHPKCRVPKITHLCFADDLMVFFRGDAGSAQSLKGVLTGFHRAT 237
+ ++R G F HP+C K+THL FADDL++F G S Q + GVL F + +
Sbjct: 571 CLSLALERAAATGSFQYHPRCEKTKLTHLSFADDLLIFSDGSLSSIQPILGVLKDFEKRS 630
Query: 238 GLQTNVTKSTVFFAGLSAQGQSDITSILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDK 297
GL ++ K++ F AGLS DI + +G LPIRYLG+PL + +++ S C PL+
Sbjct: 631 GLAISLKKTSFFAAGLSDAEVEDIKTHTGLSSGVLPIRYLGVPLHTKKISLSQCAPLLQS 690
Query: 298 IKGRIQSWKSRFLSFAGRVLLVKVVLNSMLLYWAAVFVIPKRVINDINSIFNKFLWSGVD 357
IK +++SW + L++AGR+ LV V+N + +W + F+IPK VI +I+S+ KFLW G
Sbjct: 691 IKTKLRSWTVKKLTYAGRLQLVTSVINGITNFWTSSFIIPKAVIREIDSLCTKFLWKGDI 750
Query: 358 MGCKRAPIGWESLCYPTDEKGLGFRNIEVLFEASNLRHIW----------------DLVS 401
A + WE+ C D+ GL RN++ A L+ IW +++
Sbjct: 751 TATATAKVAWETCCLAKDKGGLSLRNLDAWNRACPLKMIWLLFFSKQSIWSSWFRAEILE 810
Query: 402 G------------------RRLNDSFALLSGTVM--IPN------FGLIWHPRGLLYDAF 435
G +L D+ L+ + + N + W P G L D
Sbjct: 811 GDIELFWVINTRQKHSWLVNKLLDARELIYPWIRKNVQNGETSYFWSTNWSPYGKLSDYL 870
Query: 436 TEGYRYDSHLYLDARVSQFIGQSGWVFPTHITAMLGAIAAEAREVVVDSTLGDEVIWMPS 495
+ +A +++ WV P + + + + ++ DE+ W P
Sbjct: 871 QTSTVVRFPVNRNATIAELWENGAWVVPNARSDRQLQVLSHLSTLTLNDH-EDELEWWPG 929
Query: 496 QNGE--FTLKETYEAIRPRGTRRSWTSLVWSPGGIPKHCFITWLAFRRRLKTRSLLASWG 553
E F Y+ + P SW VW GGIPKH FITWL + R TR + SWG
Sbjct: 930 NQKEIRFHTGAIYKLLCPSSPTVSWHKEVWFSGGIPKHMFITWLMVKNRCPTRDRILSWG 989
Query: 554 MVIDTSCVFYGGDEETNFHLFFGCSVIKTIWESLLHKMGF 593
+ D C++ +E+ H FF C+ IW+ + K GF
Sbjct: 990 LQTDPKCLYCNVGDESITHCFFECNFTWEIWKIIAAKCGF 1029
>XP_009103574.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 658
Score = 362 bits (930), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/602 (35%), Positives = 318/602 (52%), Gaps = 62/602 (10%)
Query: 57 VGDDFVEAIQRFFNLGKLLKEDNIMLAHEIVRDYHRPDTSARCTVKIDLKKAYDTVRWSS 116
+ D V+ Q F G++L DN++LA E+V D+H+P +R +++D+ KAYD+V W
Sbjct: 8 ITKDAVQQNQVGFVSGRVL-SDNVLLASELVADFHKPGRISRGCLQVDITKAYDSVEWEF 66
Query: 117 LFSVLGKFHFPRIFIEWLRACVTTYKFSIMVNGEAHGYFDGKRGLRQGCPISPYLFVLMM 176
+ ++L F P +F++W+ AC++T +S+ +NGE G+F G++GLRQG PIS LFVL M
Sbjct: 67 IMNILSAFQLPPLFMDWIWACISTPYYSVSLNGELAGFFPGEKGLRQGDPISSSLFVLAM 126
Query: 177 EVFVVLIDREERAGRFLLHPKCRVPKITHLCFADDLMVFFRGDAGSAQSLKGVLTGFHRA 236
+V +D R GRF +HPKC P +THL FADDL++FF G A S + + VL F R
Sbjct: 127 DVLSKELDLAAREGRFGIHPKCAFPLVTHLSFADDLLIFFDGTADSLRGIMQVLRDFQRK 186
Query: 237 TGLQTNVTKSTVFFAGLSAQGQSDITSILEFGTGSLPIRYLGLPLISSRLTYSHCIPLID 296
+GL N+ K++VF G + + GSLP++YLGLPL S RL PL+D
Sbjct: 187 SGLALNLRKTSVFLDGNDRVAAQSVATDFGLTQGSLPVKYLGLPLSSRRLGRIGYQPLLD 246
Query: 297 KIKGRIQSWKSRFLSFAGRVLLVKVVLNSMLLYWAAVFVIPKRVINDINSIFNKFLWSGV 356
K++ RI SW +R LSFAGR+ L++ V+ S++ +WAAVF +P+ + ++ + N FLWSG
Sbjct: 247 KVRQRISSWTARHLSFAGRLQLLQSVIYSIINFWAAVFPLPQGCLEELERMCNAFLWSGA 306
Query: 357 DMGCKRAPIGWESLCYPTDEKGLGFRNIEVLFEASNLRHIWDLVSGRRLNDSF------- 409
K A + W+S+C P + GLG + + L E ++ IW L G +DS
Sbjct: 307 PNSAKGAKVSWDSVCTPKESGGLGLKRLVGLNELYGVKLIWKLFEG---SDSLWVAWIKS 363
Query: 410 ALLSGTVM-IPNFG----LIW--------------------------------HPRGLLY 432
L+ G + + +F IW H LL
Sbjct: 364 HLMEGKMFWVSDFANKGSWIWRNLMKLRETARPFILCNVLSGEEASFWHDNWTHNGDLLS 423
Query: 433 DAFTEGYRYDSHLYLDARVSQFIGQSGWVF-----PTHITAMLGAIAAEAREVVVDSTLG 487
T G +Y S + +DA V + +SGW PT +TA+ A+ A+ + +DS
Sbjct: 424 VTGTLGPQY-SGISIDASVHSVVTESGWNVSRSRNPT-LTALRAALPAQTPD--IDSVEV 479
Query: 488 DEVIW---MPSQNGEFTLKETYEAIRPRGTRRSWTSLVWSPGGIPKHCFITWLAFRRRLK 544
D +W + +Q F+ ++ + P +W S+VW IPKH FI WL R R+
Sbjct: 480 DYFVWRNSVSAQPSNFSTTTLWKTLHPDPPVVNWVSIVWFKNRIPKHAFIAWLVMRNRMS 539
Query: 545 TRSLLASWGMVIDTSCVFYGGDEETNFHLFFGCSVIKTIWESLLHKMGFQRVCSVDWEEE 604
TR L WG+ + C+ G +ET HLFF C + +W L+ G V S E+
Sbjct: 540 TRDKLRHWGLHVPAECLLCGAADETTSHLFFECPFSQEVWSGLMAGTGL--VLSYKLEDM 597
Query: 605 LQ 606
L+
Sbjct: 598 LE 599
>XP_009139319.1 PREDICTED: uncharacterized protein LOC103863313 [Brassica rapa]
Length = 1139
Score = 369 bits (947), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 305/574 (53%), Gaps = 46/574 (8%)
Query: 61 FVEAIQRFFNLGKLLKEDNIMLAHEIVRDYHRPDTSARCTVKIDLKKAYDTVRWSSLFSV 120
F+ Q F +LL E N++LA E+V+DYH+ S+RC +KID+ KA+D+V+WS L +
Sbjct: 476 FIAVNQSAFIKERLLME-NVLLATELVKDYHKESVSSRCAMKIDISKAFDSVQWSFLINT 534
Query: 121 LGKFHFPRIFIEWLRACVTTYKFSIMVNGEAHGYFDGKRGLRQGCPISPYLFVLMMEVFV 180
L FP FI W+ C++T FS+ +NGE GYF RGLRQGC +SPYLFV+ M V
Sbjct: 535 LQALGFPGKFIHWITLCISTASFSVQINGELAGYFQSTRGLRQGCSLSPYLFVISMNVLS 594
Query: 181 VLIDREERAGRFLLHPKCRVPKITHLCFADDLMVFFRGDAGSAQSLKGVLTGFHRATGLQ 240
++D R + HPKC+ +THLCFADDLMVF G S + + V F + TGL+
Sbjct: 595 KMLDEAARRKKIGYHPKCKNLDLTHLCFADDLMVFSDGTKRSVEGILEVFEEFDKMTGLK 654
Query: 241 TNVTKSTVFFAGLSAQGQSDITSILEFGTGSLPIRYLGLPLISSRLTYSHCIPLIDKIKG 300
++ KST+F AG+S Q Q +I FGTGSLP+RYLGLPL++ +T S +PL++KI+
Sbjct: 655 ISLEKSTLFMAGISRQKQEEILHHFPFGTGSLPVRYLGLPLLTKHMTVSDFLPLVEKIRK 714
Query: 301 RIQSWKSRFLSFAGRVLLVKVVLNSMLLYWAAVFVIPKRVINDINSIFNKFLWSGVDMGC 360
RI SW +RFLS+AGR+ L++ V++S+ +W A F +P I ++ + + FLWSG ++
Sbjct: 715 RIGSWTNRFLSYAGRLQLIQSVISSLTNFWMAAFRLPSACIKEVEKLSSAFLWSGTELNG 774
Query: 361 KRAPIGWESLCYPTDEKGLGFRNIEVLFEASNLRHIWDLVSGRRL----NDSFALLSGT- 415
++A + W +C P E GLG R ++ + +L+ IW ++S L ++ + G+
Sbjct: 775 RKAKVSWGEVCKPKQEGGLGVRRLKDVNLVCSLKLIWRILSANSLWVNWIKAYLIRKGSL 834
Query: 416 -----------------------------VMIPN------FGLIWHPRGLLYDAFTEGYR 440
V I N + W P G L D +
Sbjct: 835 WSIKDKTQAGSWMWRKLLKCREVAKKLYRVEIKNGRNTSFWYESWSPLGCLKDLLCDRGY 894
Query: 441 YDSHLYLDARVSQFIGQSGWVFPTHITAMLGAIAAEAREVVVDSTLGDEVIWMPSQ---N 497
D + ++ARV + I + + + +++ D +W +
Sbjct: 895 IDMGISINARVCECSRHRRRFHRNPIFNRVEEVIDRYKANIIEEE--DVSLWRNGKGDYK 952
Query: 498 GEFTLKETYEAIRPRGTRRSWTSLVWSPGGIPKHCFITWLAFRRRLKTRSLLASWGMVID 557
F+LKET++ R + W +VW PK F+ W+A + RL T +++WG +D
Sbjct: 953 NRFSLKETWQVTRVQYQSCYWQKMVWFKHATPKFSFVMWMAMKERLSTGERMSNWGGSVD 1012
Query: 558 TSCVFYGGDEETNFHLFFGCSVIKTIWESLLHKM 591
T+CVF ET HLFF C IWE L ++
Sbjct: 1013 TTCVFCQDPMETLAHLFFVCPYSSQIWEGLTKRV 1046