BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0860.1
(229 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013704720.1 PREDICTED: uncharacterized protein LOC106408510 [... 125 6e-32
XP_013601198.1 PREDICTED: uncharacterized protein LOC106308597 [... 122 3e-30
XP_013658277.1 PREDICTED: uncharacterized protein LOC106363011 [... 124 4e-29
>XP_013704720.1 PREDICTED: uncharacterized protein LOC106408510 [Brassica napus]
Length = 232
Score = 125 bits (313), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 97/195 (49%), Gaps = 9/195 (4%)
Query: 25 IKQGQWDIPLYLACHLGPIVERIEEVPIEDSMEDLRVWKANEKG--EFTLKSTYEGLRRF 82
++ + D L L HL I +P+ +S DL W N + F+ ++ +R
Sbjct: 8 LRGARSDAALELQTHLTTI-----HLPMHNSPPDLVYWYINNESLEAFSASRVWDAIRHR 62
Query: 83 GPTFSWHRLVWFSHNIPRHSFISWVALRGGLKTKCKLLFWGIEVDPLCELCGSASEDEFH 142
P W VWF+ +PRH+F W+A L TK +L WGI + C LC SA ED H
Sbjct: 63 EPPHQWTASVWFNGRVPRHAFNFWIAYHDRLPTKSRLAAWGINISTACILCNSAMEDRNH 122
Query: 143 LFFQCPFSSFIWHKLLHMLGIVKVSSHDWEREVDWIAKMFKGKDGIDLLGRLAFNGYLYH 202
+F +CP S IW +L LG S H W +DW++ I LL RLA +Y+
Sbjct: 123 MFLRCPTSEVIWACVLRRLGAHHHSFHTWTTMMDWLS--LNDSRTITLLKRLASQATIYN 180
Query: 203 IWWERNKRLHNVAAI 217
IW ERN+R+H+ I
Sbjct: 181 IWTERNRRIHDNVII 195
>XP_013601198.1 PREDICTED: uncharacterized protein LOC106308597 [Brassica oleracea
var. oleracea]
Length = 308
Score = 122 bits (307), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 95/191 (49%), Gaps = 9/191 (4%)
Query: 25 IKQGQWDIPLYLACHLGPIVERIEEVPIEDSMEDLRVWKANEKG--EFTLKSTYEGLRRF 82
++ + D L L HL I +P+ +S DL W N + F+ ++ +R
Sbjct: 84 LRGARSDAALELQTHLTTI-----HLPMRNSPPDLVYWYINNESLEAFSASRVWDAIRHR 138
Query: 83 GPTFSWHRLVWFSHNIPRHSFISWVALRGGLKTKCKLLFWGIEVDPLCELCGSASEDEFH 142
P W VWF+ +PRH+F W+A L TK +L W I + C LC SA ED H
Sbjct: 139 EPPHQWTASVWFNGRVPRHAFNFWIAYHDRLPTKSRLAAWAINISTACILCNSAMEDRDH 198
Query: 143 LFFQCPFSSFIWHKLLHMLGIVKVSSHDWEREVDWIAKMFKGKDGIDLLGRLAFNGYLYH 202
LF +CP S IW +L LG S H W +DW++ I LL RLA +Y+
Sbjct: 199 LFLRCPTSEVIWACVLRRLGAHHHSFHTWTAMMDWLS--LNDSRTITLLKRLASQATIYN 256
Query: 203 IWWERNKRLHN 213
IW ERN+R+H+
Sbjct: 257 IWTERNRRIHD 267
>XP_013658277.1 PREDICTED: uncharacterized protein LOC106363011 [Brassica napus]
Length = 1558
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 115/223 (51%), Gaps = 21/223 (9%)
Query: 5 LASGMIIDSV---------LHAKATVSACIKQGQWDIPLYLACHLGPIVERIEEVP--IE 53
L G +ID V + ATV++ G+W++ + HL ++ RI VP +E
Sbjct: 1297 LEMGQLIDVVGDSGTQIMGIQRYATVASAASSGRWNLRRCRSNHLRAMITRINSVPPPVE 1356
Query: 54 DSMEDLRVWKANE---KGEFTLKSTYEGLRRFGPTFSWHRLVWFSHNIPRHSFISWVALR 110
++ D +W+ E K F+ K+T+ +RR G T W +L+WFSH +PR+SFI+W+A+R
Sbjct: 1357 EAGSDCLLWRHGENDYKAWFSSKNTWNQIRRQGNTVEWSKLIWFSHAVPRYSFIAWLAIR 1416
Query: 111 GGLKTKCKLLFWGIEVDPLCELCGSASEDEFHLFFQCPFSSFIWHKLLHMLGIVKVSSHD 170
L T + WG C LCG +E HLFF CP+S IW +L L + D
Sbjct: 1417 NRLSTGDRTQIWGEHQS--CRLCGEPNESRDHLFFACPYSYTIWTELTSSLR--PRPNPD 1472
Query: 171 WEREVDWIAKMFKGKDGID-LLGRLAFNGYLYHIWWERNKRLH 212
W V + + + ID L RL+F ++ +W ERN R H
Sbjct: 1473 WGITVTML--LSPRRSAIDSCLLRLSFQAVIHSVWRERNSRKH 1513