BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000106.1_g0900.1
(421 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium ... 221 5e-60
JAT50758.1 Retrovirus-related Pol polyprotein LINE-1, partial [A... 212 4e-57
XP_010672356.1 PREDICTED: uncharacterized protein LOC104888940 [... 202 5e-55
>JAT53351.1 Retrovirus-related Pol polyprotein LINE-1 [Anthurium amnicola]
Length = 1225
Score = 221 bits (562), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 178/300 (59%), Gaps = 6/300 (2%)
Query: 105 ERLKMVVFSLVSENQLAFISGRRIQDNIMLPHGRCQYGVRLQGDPANPVLRRQERVANEN 164
++LK V +L S N+ F G + + Q +LQ DP NP L E+ E
Sbjct: 286 QKLKSVKNALRSWNKYGF--GDVLANISCAKKKLVQMQGQLQDDPLNPDLISNEKSVREE 343
Query: 165 YSNVVRAETTMLRQRAKVDWLTLDDSNTAYFHNSIKERKSRNAITRLTREDGSVVEDPVE 224
+S + AE ++ RQ+AK WLT D+N+ +FH +IK R+ N+I + G ++ED +
Sbjct: 344 FSRAILAENSLARQKAKQFWLTQGDTNSKFFHAAIKARRMFNSIRKCRNAQGVILEDITQ 403
Query: 225 IANMCVDFYRDLFGREDEDNEALDHMSNVEFSRPLTEAEGALLIMRVTRDEIYTALQTIG 284
+ + + F++ L ++ +D ++E S+ L E + LL R + D+I +
Sbjct: 404 VKSYTLSFFQQLLNQD----RIIDSNPHLEISKILVEEDRNLLNRRYSDDDIKAVVMKSP 459
Query: 285 SDRSPGPDGFSSHFLKACWSIMGDDFVETIQNFFSSGKLLKEVNSTFVTLIPKIDNASSV 344
+SPGPDGF + F + CW I+G DF I NF +GKLLK+V +TF+TLIPK A S+
Sbjct: 460 KMKSPGPDGFPAEFFQFCWDIVGKDFCSAIHNFLITGKLLKQVGTTFITLIPKDSCADSL 519
Query: 345 SDFRPISYCNVLYKCITKILTIRLKGVIYSMISPNQSAFISGRTIQDNIMLAHEIVRNYH 404
+FRPIS CN +YK I+K+L RLK V+ +ISP+Q AFI GR IQD+I+LA+++V+N H
Sbjct: 520 DNFRPISLCNFVYKVISKLLANRLKKVLDKIISPHQMAFIEGRKIQDSILLANDLVKNIH 579
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 48/178 (26%)
Query: 1 MVEEQEQVIEECVKFYERILGTEEVNDEEDDVLDSFQFQHPLGNEDCSSLIQPVSRDKII 60
++E+ QV + F++++L + + D + + L ED + L + S D I
Sbjct: 397 ILEDITQVKSYTLSFFQQLLNQDRIIDSNPHL----EISKILVEEDRNLLNRRYSDDDIK 452
Query: 61 HALSTIGSEKAPGPDGFFSFF--------------------------------------- 81
+ K+PGPDGF + F
Sbjct: 453 AVVMKSPKMKSPGPDGFPAEFFQFCWDIVGKDFCSAIHNFLITGKLLKQVGTTFITLIPK 512
Query: 82 -----SRGDFRPISCCNVVYKCIPKILTERLKMVVFSLVSENQLAFISGRRIQDNIML 134
S +FRPIS CN VYK I K+L RLK V+ ++S +Q+AFI GR+IQD+I+L
Sbjct: 513 DSCADSLDNFRPISLCNFVYKVISKLLANRLKKVLDKIISPHQMAFIEGRKIQDSILL 570
>JAT50758.1 Retrovirus-related Pol polyprotein LINE-1, partial [Anthurium
amnicola]
Length = 1070
Score = 212 bits (539), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 161/261 (61%), Gaps = 4/261 (1%)
Query: 144 RLQGDPANPVLRRQERVANENYSNVVRAETTMLRQRAKVDWLTLDDSNTAYFHNSIKERK 203
+LQ P N L +E+ A YS + AE M RQ+AK WL+ DSNT +FH +IK R+
Sbjct: 315 QLQHAPLNEDLISKEKAARMEYSQAIHAENMMARQKAKQFWLSQGDSNTKFFHAAIKSRR 374
Query: 204 SRNAITRLTREDGSVVEDPVEIANMCVDFYRDLFGREDEDNEALDHMSNVEFSRPLTEAE 263
N+I + E G ++ED ++ + + ++++L ++ ++H +E S+ L E
Sbjct: 375 MLNSIRKCKNEQGDLIEDLSQVKSHTLLYFQNLLNQD----RLMNHPGQIEISKTLNADE 430
Query: 264 GALLIMRVTRDEIYTALQTIGSDRSPGPDGFSSHFLKACWSIMGDDFVETIQNFFSSGKL 323
L + +EI + +SPGPDGF++ F ++CW I+G D E +Q+FF +G+L
Sbjct: 431 QLSLSRGFSVEEIKQVVMDSPKLKSPGPDGFTAEFFQSCWDIVGKDLCEAVQHFFITGRL 490
Query: 324 LKEVNSTFVTLIPKIDNASSVSDFRPISYCNVLYKCITKILTIRLKGVIYSMISPNQSAF 383
LK+V +TF+TLIPK A S+ FRPIS CN +YK I+K+L R+ V+ +ISP+Q AF
Sbjct: 491 LKQVGATFITLIPKDACADSLDLFRPISLCNFIYKVISKLLAGRMHRVLEKLISPHQMAF 550
Query: 384 ISGRTIQDNIMLAHEIVRNYH 404
I GR IQD+I LA+++V+N H
Sbjct: 551 IKGRKIQDSIFLANDLVKNIH 571
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 48/178 (26%)
Query: 1 MVEEQEQVIEECVKFYERILGTEEVNDEEDDVLDSFQFQHPLGNEDCSSLIQPVSRDKII 60
++E+ QV + +++ +L + + + + + L ++ SL + S ++I
Sbjct: 389 LIEDLSQVKSHTLLYFQNLLNQDRLMNHPGQI----EISKTLNADEQLSLSRGFSVEEIK 444
Query: 61 HALSTIGSEKAPGPDGFFS--------------------FFSRGD--------------- 85
+ K+PGPDGF + FF G
Sbjct: 445 QVVMDSPKLKSPGPDGFTAEFFQSCWDIVGKDLCEAVQHFFITGRLLKQVGATFITLIPK 504
Query: 86 ---------FRPISCCNVVYKCIPKILTERLKMVVFSLVSENQLAFISGRRIQDNIML 134
FRPIS CN +YK I K+L R+ V+ L+S +Q+AFI GR+IQD+I L
Sbjct: 505 DACADSLDLFRPISLCNFIYKVISKLLAGRMHRVLEKLISPHQMAFIKGRKIQDSIFL 562
>XP_010672356.1 PREDICTED: uncharacterized protein LOC104888940 [Beta vulgaris
subsp. vulgaris]
Length = 650
Score = 202 bits (513), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 178/305 (58%), Gaps = 9/305 (2%)
Query: 103 LTERLKMVVFSLVSENQLAFISGRRIQDNIMLPHG-RCQYGVRLQGDPANPVLRRQERVA 161
+ +RLK V + N++ F +I D H CQ +LQ P ++ A
Sbjct: 273 VMQRLKRVKAEMKVLNKVGF-KDIQIADCKAYEHLLECQN--QLQQRPDGDACANEKEAA 329
Query: 162 NENYSNVVRAETTMLRQRAKVDWLTLDDSNTAYFHNSIKERKSRNAITRLTREDGSVVED 221
NE Y V + L+Q++K DWL + D NT+ FH +IK+R+++NAI + G+ VE
Sbjct: 330 NE-YRKVHAHYISFLQQKSKYDWLKMGDENTSLFHRAIKKRRTQNAIYGIHDIHGTWVEG 388
Query: 222 PVEIANMCVDFYRDLFGREDEDNEALDHMSNVEFSRPLTEAEG-ALLIMRVTRDEIYTAL 280
++A+ +D+Y+ L G E + + + + P AE A L+ +T +EI AL
Sbjct: 389 D-QVADAFIDYYKGLLGTAREGSSVIS--AEIMAQGPCLNAEQQADLVSEITDEEIQQAL 445
Query: 281 QTIGSDRSPGPDGFSSHFLKACWSIMGDDFVETIQNFFSSGKLLKEVNSTFVTLIPKIDN 340
+I D+SPGPDGF + F KA W I+G+D +++FF K+LK++N+T +TL+PK
Sbjct: 446 FSIPDDKSPGPDGFGTAFYKASWEIIGNDITTAVKDFFIHRKMLKDMNNTLITLVPKSKC 505
Query: 341 ASSVSDFRPISYCNVLYKCITKILTIRLKGVIYSMISPNQSAFISGRTIQDNIMLAHEIV 400
S+VSD+RPI+ CNV+YKCITKI+ R++ ++ +I+ NQ AFI GR I NIM+ +IV
Sbjct: 506 PSNVSDYRPIACCNVIYKCITKIMCNRMRKILPEIIAENQGAFIQGRFIGHNIMVCQDIV 565
Query: 401 RNYHR 405
Y R
Sbjct: 566 HGYGR 570
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 49/177 (27%)
Query: 4 EQEQVIEECVKFYERILGTEEVNDEEDDVLDS-FQFQHP-LGNEDCSSLIQPVSRDKIIH 61
E +QV + + +Y+ +LGT E V+ + Q P L E + L+ ++ ++I
Sbjct: 387 EGDQVADAFIDYYKGLLGTAR---EGSSVISAEIMAQGPCLNAEQQADLVSEITDEEIQQ 443
Query: 62 ALSTIGSEKAPGPDGFFSFFSRG------------------------------------- 84
AL +I +K+PGPDGF + F +
Sbjct: 444 ALFSIPDDKSPGPDGFGTAFYKASWEIIGNDITTAVKDFFIHRKMLKDMNNTLITLVPKS 503
Query: 85 -------DFRPISCCNVVYKCIPKILTERLKMVVFSLVSENQLAFISGRRIQDNIML 134
D+RPI+CCNV+YKCI KI+ R++ ++ +++ENQ AFI GR I NIM+
Sbjct: 504 KCPSNVSDYRPIACCNVIYKCITKIMCNRMRKILPEIIAENQGAFIQGRFIGHNIMV 560