BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0080.1
(237 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABA99232.1 retrotransposon protein, putative, Ty1-copia subclass... 265 8e-86
YP_514636.1 hypothetical protein OrsaiPp07 (mitochondrion) [Oryz... 265 2e-83
YP_009241997.1 hypothetical protein (mitochondrion) [Oryza minut... 265 2e-83
>ABA99232.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 308
Score = 265 bits (678), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 155/215 (72%)
Query: 1 MQEEYDALISNKTWVLIPSLSSLNILRCKWVYRIKYKVDGTIERYKVRLVAKGFHQMDGL 60
M EEY AL+ N TW L+P+ N++ CKWVY+IK K DGTI+RYK RLVAKGF Q G+
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 61 DYSETFSPVVKATTIRLVLTIVVSNHWSILQLDVSNAFLHGILEEDVFMSQPPGFTDASS 120
DY ETFSPVVKA TIRL+L++ VSN WS+ QLDV NAFLHG+LEEDV+M QPPG+ D S
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSK 120
Query: 121 PSYVCKLQKSLYGLKQAPKAWFTRFASFLFTLDFQKSSHDHSMFVKSQGYSIIIILLYVD 180
YVCKL K+LYGLKQAP+AWF+R + L L FQ S D S+F +G I +L+YVD
Sbjct: 121 LDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIYVD 180
Query: 181 DIVLTGTHSSDLTLLIQKLESEFSMKELGVGFYTL 215
DI++ + + L+Q L+ EF++K+LG Y L
Sbjct: 181 DIIVASSCEKATSALLQDLKEEFALKDLGALHYFL 215
>YP_514636.1 hypothetical protein OrsaiPp07 (mitochondrion) [Oryza sativa Indica
Group] YP_003433855.1 hypothetical protein OrrupM_p18
(mitochondrion) [Oryza rufipogon] AAZ99275.1
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] AAZ99329.1 hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group] AAZ99382.1
hypothetical protein (mitochondrion) [Oryza sativa
Japonica Group] BAI67959.1 hypothetical protein
(mitochondrion) [Oryza rufipogon] BAI67987.1
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] AER12982.1 hypothetical protein
(mitochondrion) [Oryza sativa Indica Group] AER13050.1
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] AEZ03755.1 hypothetical protein
(mitochondrion) [Oryza sativa Indica Group] AEZ03764.1
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] BAN67511.1 hypothetical protein
(mitochondrion) [Oryza rufipogon] BAN67513.1
hypothetical protein (mitochondrion) [Oryza rufipogon]
BAV53152.1 hypothetical protein (mitochondrion) [Oryza
sativa Indica Group]
Length = 490
Score = 265 bits (678), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 155/215 (72%)
Query: 1 MQEEYDALISNKTWVLIPSLSSLNILRCKWVYRIKYKVDGTIERYKVRLVAKGFHQMDGL 60
M EEY AL+ N TW L+P+ N++ CKWVY+IK K DGTI+RYK RLVAKGF Q G+
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 61 DYSETFSPVVKATTIRLVLTIVVSNHWSILQLDVSNAFLHGILEEDVFMSQPPGFTDASS 120
DY ETFSPVVKA TIRL+L++ VSN WS+ QLDV NAFLHG+LEEDV+M QPPG+ D S
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSK 120
Query: 121 PSYVCKLQKSLYGLKQAPKAWFTRFASFLFTLDFQKSSHDHSMFVKSQGYSIIIILLYVD 180
YVCKL K+LYGLKQAP+AWF+R + L L FQ S D S+F +G I +L+YVD
Sbjct: 121 LDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIYVD 180
Query: 181 DIVLTGTHSSDLTLLIQKLESEFSMKELGVGFYTL 215
DI++ + + L+Q L+ EF++K+LG Y L
Sbjct: 181 DIIVASSCEKATSALLQDLKEEFALKDLGALHYFL 215
>YP_009241997.1 hypothetical protein (mitochondrion) [Oryza minuta] AMA06715.1
hypothetical protein (mitochondrion) [Oryza minuta]
Length = 490
Score = 265 bits (678), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 123/215 (57%), Positives = 155/215 (72%)
Query: 1 MQEEYDALISNKTWVLIPSLSSLNILRCKWVYRIKYKVDGTIERYKVRLVAKGFHQMDGL 60
M EEY AL+ N TW L+P+ N++ CKWVY+IK K DGTI+RYK RLVAKGF Q G+
Sbjct: 1 MDEEYGALMRNNTWHLVPATQGRNLIDCKWVYKIKRKADGTIDRYKARLVAKGFKQRYGI 60
Query: 61 DYSETFSPVVKATTIRLVLTIVVSNHWSILQLDVSNAFLHGILEEDVFMSQPPGFTDASS 120
DY ETFSPVVKA TIRL+L++ VSN WS+ QLDV NAFLHG+LEEDV+M QPPG+ D S
Sbjct: 61 DYEETFSPVVKAATIRLILSLAVSNGWSLRQLDVQNAFLHGVLEEDVYMRQPPGYEDKSK 120
Query: 121 PSYVCKLQKSLYGLKQAPKAWFTRFASFLFTLDFQKSSHDHSMFVKSQGYSIIIILLYVD 180
YVCKL K+LYGLKQAP+AWF+R + L L FQ S D S+F +G I +L+YVD
Sbjct: 121 LDYVCKLDKALYGLKQAPRAWFSRLSMKLQNLGFQPSKADASLFFYKKGTISIFVLIYVD 180
Query: 181 DIVLTGTHSSDLTLLIQKLESEFSMKELGVGFYTL 215
DI++ + + L+Q L+ EF++K+LG Y L
Sbjct: 181 DIIVASSCEKATSALLQDLKEEFALKDLGALHYFL 215