BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0280.1
(146 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010271340.1 PREDICTED: ubiquitin-conjugating enzyme E2 varian... 266 6e-90
XP_010270421.1 PREDICTED: ubiquitin-conjugating enzyme E2 varian... 263 2e-88
XP_002284969.1 PREDICTED: ubiquitin-conjugating enzyme E2 varian... 261 7e-88
>XP_010271340.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like isoform
X2 [Nelumbo nucifera]
Length = 159
Score = 266 bits (681), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 131/159 (82%), Positives = 140/159 (88%), Gaps = 13/159 (8%)
Query: 1 MGTEGDKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHD 60
MG+EG +V+VPRNFRLLEELERGEKGIGDGTVSYGMDDADD+ MRSWTGTIIGPP+TVH+
Sbjct: 1 MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDVYMRSWTGTIIGPPNTVHE 60
Query: 61 GRIYQLKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM-------------RECTMEDIL 107
GRIYQLKLFCD+DYPDNPPTV FQTRINMTCVNQETGM RE TMEDIL
Sbjct: 61 GRIYQLKLFCDKDYPDNPPTVRFQTRINMTCVNQETGMVEPSQFPMLANWQREYTMEDIL 120
Query: 108 TQLKKEMMSPQNRKLSQPPEGNEEGRVDQKGLVLKCAIL 146
TQLKKEMMSPQNRKL+QPPEGNEE RVDQKG+VLKC IL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEQRVDQKGIVLKCCIL 159
>XP_010270421.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A-like [Nelumbo
nucifera]
Length = 159
Score = 263 bits (672), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 130/159 (81%), Positives = 138/159 (86%), Gaps = 13/159 (8%)
Query: 1 MGTEGDKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHD 60
MG+EG +V+VPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTIIGPP+TVH+
Sbjct: 1 MGSEGSRVIVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMHSWTGTIIGPPNTVHE 60
Query: 61 GRIYQLKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM-------------RECTMEDIL 107
GRIYQLKLFCD+DYPDNPPTV FQTRINM CVNQETGM RE TMEDIL
Sbjct: 61 GRIYQLKLFCDKDYPDNPPTVRFQTRINMICVNQETGMVEPSQFPMLADWQREYTMEDIL 120
Query: 108 TQLKKEMMSPQNRKLSQPPEGNEEGRVDQKGLVLKCAIL 146
TQLKKEMMSPQNRKL+QPPEGNEE RVDQKG+VLKC IL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEQRVDQKGIVLKCCIL 159
>XP_002284969.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A [Vitis
vinifera] CAN63218.1 hypothetical protein VITISV_026897
[Vitis vinifera] CBI26841.3 unnamed protein product,
partial [Vitis vinifera]
Length = 159
Score = 261 bits (668), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 129/159 (81%), Positives = 138/159 (86%), Gaps = 13/159 (8%)
Query: 1 MGTEGDKVLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMRSWTGTIIGPPDTVHD 60
MG+EG V+VPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M+SWTGTIIGPP+TVH+
Sbjct: 1 MGSEGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60
Query: 61 GRIYQLKLFCDEDYPDNPPTVGFQTRINMTCVNQETGM-------------RECTMEDIL 107
GRIYQLKLFC +DYPDNPPTV FQTRINMTCVNQETG+ RE TMEDIL
Sbjct: 61 GRIYQLKLFCGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDIL 120
Query: 108 TQLKKEMMSPQNRKLSQPPEGNEEGRVDQKGLVLKCAIL 146
TQLKKEMMSPQNRKL+QPPEGNEE R+DQKGLVLKC IL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159