BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0380.1
(817 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010278713.1 PREDICTED: polyadenylate-binding protein RBP45-li... 201 5e-55
KVH89625.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu... 202 2e-54
XP_010278711.1 PREDICTED: polyadenylate-binding protein RBP45-li... 202 7e-54
>XP_010278713.1 PREDICTED: polyadenylate-binding protein RBP45-like [Nelumbo
nucifera]
Length = 310
Score = 201 bits (512), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/138 (70%), Positives = 109/138 (78%)
Query: 273 TSADEVRTLLISDLQPWMDERYIHGCFANTREVVNVKVIRNKQTGQYECYGFVEFVSHAA 332
TSADEVRTL I DLQ WM+E YIH CFA+T EV +VKVIRNKQTGQ E YGF+EFV+ A
Sbjct: 91 TSADEVRTLWIGDLQYWMEESYIHSCFAHTGEVASVKVIRNKQTGQSEGYGFIEFVTRPA 150
Query: 333 AERILQTYNRSLMPTVEQTFRMNWTSFGSGVKRQDSNADFINFVGDLTSDVTDYTLHETF 392
AERILQTYN +LMP EQ FR+NW SFG G +R D +ADF FVGDL SDVTDY L ETF
Sbjct: 151 AERILQTYNGTLMPNAEQNFRLNWASFGLGERRPDDSADFTIFVGDLASDVTDYMLQETF 210
Query: 393 PSHYSSVRDAKVITDNST 410
SHY SV+ AKV+TD +T
Sbjct: 211 RSHYPSVKGAKVVTDRTT 228
>KVH89625.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 384
Score = 202 bits (514), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 119/170 (70%), Gaps = 4/170 (2%)
Query: 245 YSYNQ--PPQQTQP--YMMPQQQQQSYPDPQPTSADEVRTLLISDLQPWMDERYIHGCFA 300
Y+YNQ P T P Y P PQP SADE+RTL I DLQ WMDE+Y+ CFA
Sbjct: 36 YNYNQQSPAAATIPPQYTAPAAAPIGGATPQPASADEIRTLWIGDLQYWMDEQYLLSCFA 95
Query: 301 NTREVVNVKVIRNKQTGQYECYGFVEFVSHAAAERILQTYNRSLMPTVEQTFRMNWTSFG 360
T EVV+ KVIRNKQ+GQ E YGF+EF + AAAER LQ YN +LMP VEQ FR+NW +FG
Sbjct: 96 QTGEVVSAKVIRNKQSGQSEGYGFIEFANRAAAERHLQAYNGTLMPNVEQLFRLNWATFG 155
Query: 361 SGVKRQDSNADFINFVGDLTSDVTDYTLHETFPSHYSSVRDAKVITDNST 410
+G KRQD D+ FVGDL +DVTDYTL ETF +HY SV+ AKV+TD T
Sbjct: 156 AGEKRQDDTPDYTVFVGDLAADVTDYTLQETFRAHYPSVKGAKVVTDRLT 205
>XP_010278711.1 PREDICTED: polyadenylate-binding protein RBP45-like isoform X3
[Nelumbo nucifera] XP_010278712.1 PREDICTED:
polyadenylate-binding protein RBP45-like isoform X4
[Nelumbo nucifera]
Length = 423
Score = 202 bits (513), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 97/138 (70%), Positives = 109/138 (78%)
Query: 273 TSADEVRTLLISDLQPWMDERYIHGCFANTREVVNVKVIRNKQTGQYECYGFVEFVSHAA 332
TSADEVRTL I DLQ WM+E YIH CFA+T EV +VKVIRNKQTGQ E YGF+EFV+ A
Sbjct: 91 TSADEVRTLWIGDLQYWMEESYIHSCFAHTGEVASVKVIRNKQTGQSEGYGFIEFVTRPA 150
Query: 333 AERILQTYNRSLMPTVEQTFRMNWTSFGSGVKRQDSNADFINFVGDLTSDVTDYTLHETF 392
AERILQTYN +LMP EQ FR+NW SFG G +R D +ADF FVGDL SDVTDY L ETF
Sbjct: 151 AERILQTYNGTLMPNAEQNFRLNWASFGLGERRPDDSADFTIFVGDLASDVTDYMLQETF 210
Query: 393 PSHYSSVRDAKVITDNST 410
SHY SV+ AKV+TD +T
Sbjct: 211 RSHYPSVKGAKVVTDRTT 228