BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0390.1
(132 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010253296.1 PREDICTED: protein UPSTREAM OF FLC [Nelumbo nucif... 104 7e-24
XP_010937705.1 PREDICTED: protein UPSTREAM OF FLC-like [Elaeis g... 101 1e-22
OAY72131.1 Protein UPSTREAM OF FLC [Ananas comosus] 100 2e-22
>XP_010253296.1 PREDICTED: protein UPSTREAM OF FLC [Nelumbo nucifera]
Length = 444
Score = 104 bits (259), Expect = 7e-24, Method: Composition-based stats.
Identities = 47/74 (63%), Positives = 61/74 (82%), Gaps = 5/74 (6%)
Query: 1 MAVASRGRTDIQ---KWRDNNTRINPERTKVWIEPKNEHHRRVPVVYYLSKNGHLQHPHF 57
MAV SRGRT++Q KW+D T +PERTK+W EP+ + R+VPVVYYLS+NGHL+HPHF
Sbjct: 1 MAVTSRGRTELQIPKKWKDRET--SPERTKIWTEPRPKTERKVPVVYYLSRNGHLEHPHF 58
Query: 58 IEVSLSSNDGLYLK 71
+EV LSS++GLYL+
Sbjct: 59 MEVPLSSSEGLYLR 72
>XP_010937705.1 PREDICTED: protein UPSTREAM OF FLC-like [Elaeis guineensis]
Length = 428
Score = 101 bits (251), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/73 (67%), Positives = 61/73 (83%), Gaps = 4/73 (5%)
Query: 1 MAVASRGRTD-IQKWRDNNTRINPERTKVWIEPKNEHH-RRVPVVYYLSKNGHLQHPHFI 58
MAVASRGR + +++W+D T +PERTKVW EPK+ R+VPVVYYLS+NG L+HPHF+
Sbjct: 1 MAVASRGRAELVKQWKDRET--SPERTKVWTEPKSRSSPRKVPVVYYLSRNGQLEHPHFM 58
Query: 59 EVSLSSNDGLYLK 71
EVSLSS+DGLYLK
Sbjct: 59 EVSLSSSDGLYLK 71
>OAY72131.1 Protein UPSTREAM OF FLC [Ananas comosus]
Length = 433
Score = 100 bits (249), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/73 (64%), Positives = 61/73 (83%), Gaps = 4/73 (5%)
Query: 1 MAVASRGRTDI-QKWRDNNTRINPERTKVWIEPKNE-HHRRVPVVYYLSKNGHLQHPHFI 58
MAVASRGR+++ ++WRD T +PERTKVW EPK + R+VPVVYYL +NG L+HPHF+
Sbjct: 1 MAVASRGRSELMRQWRDRAT--SPERTKVWTEPKTKISERKVPVVYYLCRNGQLEHPHFM 58
Query: 59 EVSLSSNDGLYLK 71
EV+LSS+DGLYL+
Sbjct: 59 EVTLSSSDGLYLR 71