BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0560.1
(589 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP60296.1 Retrovirus-related Pol polyprotein from transposon TN... 357 e-108
BAA11674.1 unnamed protein product [Nicotiana tabacum] 363 e-108
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 363 e-108
>KYP60296.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 990
Score = 357 bits (917), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/322 (55%), Positives = 228/322 (70%), Gaps = 19/322 (5%)
Query: 283 RLWDPVDKKIIRSRDVVFLENQTIEDSGKVEKHE-NHSNDLIDLDPHISSKVMHDNA--- 338
R +DP++KK++RSRDV F+E+QTIED KVEK +L D+DP DN
Sbjct: 596 RFYDPIEKKLVRSRDVQFMEDQTIEDIDKVEKTTPEKDRNLTDVDPMRLPIHNLDNVDGS 655
Query: 339 ---GEEQNHEDE----AHEDVPMGDDVEQGMEVHHEP--------PAELRRSTRDRAPST 383
GE+ + D+ DVP+ DD E+ H E +LRRS R R PST
Sbjct: 656 VQPGEQHDDVDDQQLGGGLDVPIDDDQEEHEMSHDENIDDAPEPHQVQLRRSNRQRQPST 715
Query: 384 KYPPHEYVMVTDSGEPQCYEEAIDDEHKKEWLKAMQDEIESLHKKNTFKLVEKPKNKKIL 443
+Y EYV +TD GEP+C+EEA++ E K++WL AMQDE++SLH +T+ LV+ PK K+ L
Sbjct: 716 RYSSDEYVTLTDGGEPECFEEALESEEKQQWLDAMQDEMKSLHDNHTYDLVKLPKGKRAL 775
Query: 444 KNKWVFKINTEERNSQPRYKARLVVKGFGQKKGIAFDEIFSPVVKMSSIRLVLGLAANMN 503
+N+W+F++ E ++ PRYKARLVVKGF Q+KG+ F+EIFSPVVKMSSIR VL LAA +N
Sbjct: 776 ENRWIFRVKQESNSTSPRYKARLVVKGFRQRKGVDFNEIFSPVVKMSSIRAVLSLAATLN 835
Query: 504 LEIEQLDVKTAFLHGDLEKDVYMEQPTGFEVKGKEHLVCKLEKSLYGLKHAPRQWYKKFE 563
LE+EQ+DVKTAFLHGDLE+++YM QP GF+VKGKE VC+L KSLYGLK APRQWYKKFE
Sbjct: 836 LEVEQMDVKTAFLHGDLEEEIYMRQPDGFQVKGKEDCVCRLRKSLYGLKQAPRQWYKKFE 895
Query: 564 SFMKDQGYHRMASDHCVFVHKF 585
SFM +QGY + SDHCVFV F
Sbjct: 896 SFMCEQGYKKTTSDHCVFVKMF 917
Score = 162 bits (411), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 121/196 (61%), Gaps = 3/196 (1%)
Query: 109 EPTSYREAAKDTE---CVKAMNEEYQALLDNKTWSLVPYNNHMNILGCKWVFKIMQKSDG 165
EP + EA + E + AM +E ++L DN T+ LV L +W+F++ Q+S+
Sbjct: 730 EPECFEEALESEEKQQWLDAMQDEMKSLHDNHTYDLVKLPKGKRALENRWIFRVKQESNS 789
Query: 166 TIERYKTRLVAKGFHQQEGVDYEKTFSPVVKANTIRIVLTIAVTNSWHIKQLDVSNAFIH 225
T RYK RLV KGF Q++GVD+ + FSPVVK ++IR VL++A T + ++Q+DV AF+H
Sbjct: 790 TSPRYKARLVVKGFRQRKGVDFNEIFSPVVKMSSIRAVLSLAATLNLEVEQMDVKTAFLH 849
Query: 226 GTLDEAVYMIQPPGFVQPEKDKHVCHLHKALFGLKQAPRAWFNKFANFLLAYRFKKSRLW 285
G L+E +YM QP GF K+ VC L K+L+GLKQAPR W+ KF +F+ +KK+
Sbjct: 850 GDLEEEIYMRQPDGFQVKGKEDCVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKTTSD 909
Query: 286 DPVDKKIIRSRDVVFL 301
V K+ D + L
Sbjct: 910 HCVFVKMFSDDDFIIL 925
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 363 bits (931), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/332 (55%), Positives = 236/332 (71%), Gaps = 19/332 (5%)
Query: 267 FNKFANFLLAYRFKKSRLWDPVDKKIIRSRDVVFLENQTIEDSGKVEKHENHSNDLIDLD 326
F + +L Y+F +DPV+KK++RSRDVVF+E+QTIED KVEK + S + +L
Sbjct: 673 FIGYGQDMLGYKF-----YDPVEKKLVRSRDVVFVEDQTIEDIDKVEKSTDDSAEF-ELP 726
Query: 327 PHISSKVMHDNAGEEQN------HEDEAHEDVPMGDDVEQGMEVHHEP-------PAELR 373
P + + + D+ + Q +EDE + D+ + + +P P
Sbjct: 727 PTVVPRQVGDDVQDNQPEAPGLPNEDELADTEGNEDNGDDDADEEDQPQPPILNNPPYHT 786
Query: 374 RSTRDRAPSTKYPPHEYVMVTDSGEPQCYEEAIDDEHKKEWLKAMQDEIESLHKKNTFKL 433
RS R ST+Y PHEYV++TD GEP +EEAIDDEHK++W++AMQDEI+SLH+ TF+L
Sbjct: 787 RSGRVVQQSTRYSPHEYVLLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFEL 846
Query: 434 VEKPKNKKILKNKWVFKINTEERNSQPRYKARLVVKGFGQKKGIAFDEIFSPVVKMSSIR 493
V+ PK K+ LKNKWVFK+ +E NS PR+KARLVVKGF Q+KGI FDEIFSPVVKM+SIR
Sbjct: 847 VKLPKGKRALKNKWVFKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIR 906
Query: 494 LVLGLAANMNLEIEQLDVKTAFLHGDLEKDVYMEQPTGFEVKGKEHLVCKLEKSLYGLKH 553
VLGLAA++NLE+EQ+DVKTAFLHGDLE+++YMEQP GF+ KGKE VC+L KSLYGLK
Sbjct: 907 TVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQ 966
Query: 554 APRQWYKKFESFMKDQGYHRMASDHCVFVHKF 585
APRQWYKKFES M GY + SDHCVF KF
Sbjct: 967 APRQWYKKFESVMGQHGYKKTTSDHCVFAQKF 998
Score = 160 bits (404), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 119/183 (65%), Gaps = 3/183 (1%)
Query: 103 LLQLPIEPTSYREAAKDT---ECVKAMNEEYQALLDNKTWSLVPYNNHMNILGCKWVFKI 159
LL EP S+ EA D + ++AM +E ++L +NKT+ LV L KWVFK+
Sbjct: 805 LLTDGGEPDSFEEAIDDEHKEKWIEAMQDEIKSLHENKTFELVKLPKGKRALKNKWVFKM 864
Query: 160 MQKSDGTIERYKTRLVAKGFHQQEGVDYEKTFSPVVKANTIRIVLTIAVTNSWHIKQLDV 219
++ R+K RLV KGF+Q++G+D+++ FSPVVK +IR VL +A + + ++Q+DV
Sbjct: 865 KHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDV 924
Query: 220 SNAFIHGTLDEAVYMIQPPGFVQPEKDKHVCHLHKALFGLKQAPRAWFNKFANFLLAYRF 279
AF+HG L+E +YM QP GF Q K+ +VC L K+L+GLKQAPR W+ KF + + + +
Sbjct: 925 KTAFLHGDLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGY 984
Query: 280 KKS 282
KK+
Sbjct: 985 KKT 987
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 363 bits (931), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/361 (52%), Positives = 252/361 (69%), Gaps = 23/361 (6%)
Query: 247 KHVCHLHKALFGLK---QAPRAWFNKFAN-----FLLAYRFKK--SRLWDPVDKKIIRSR 296
K V + H +FG K PR +K + + Y F + RL+DPV+KK++RSR
Sbjct: 636 KDVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSR 695
Query: 297 DVVFLENQTIEDSGKVEKHENH-SNDLIDLDPHISSKVMHDNAGEEQN----------HE 345
DVVF ENQTIED KV++ E+ S L+D++P +S + D ++N
Sbjct: 696 DVVFFENQTIEDIDKVKQPESRDSGSLVDIEP-VSRRYTDDVDEVQENVQNGDPVPDYQG 754
Query: 346 DEAHEDVPMGDDVEQGMEVHHEPPAEL-RRSTRDRAPSTKYPPHEYVMVTDSGEPQCYEE 404
D D D V Q EV + P +L RRS R+R PST+Y P +YV++TD GEP+ YEE
Sbjct: 755 DTVDVDGHADDVVHQEQEVPSQVPVDLPRRSDRERRPSTRYSPSQYVLLTDGGEPESYEE 814
Query: 405 AIDDEHKKEWLKAMQDEIESLHKKNTFKLVEKPKNKKILKNKWVFKINTEERNSQPRYKA 464
A++ + K++W +AMQ+E+ SL+ +TF+LV+ PKN+K LKN+WV+++ EE S PR+KA
Sbjct: 815 AMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKA 874
Query: 465 RLVVKGFGQKKGIAFDEIFSPVVKMSSIRLVLGLAANMNLEIEQLDVKTAFLHGDLEKDV 524
RLVVKGF QKKGI FDEIFSPVVK SSIR+VLGLAA +++EIEQ+DVKTAFLHGDL++++
Sbjct: 875 RLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEI 934
Query: 525 YMEQPTGFEVKGKEHLVCKLEKSLYGLKHAPRQWYKKFESFMKDQGYHRMASDHCVFVHK 584
YMEQP GF+VKGKE VC+L+KSLYGLK APRQWYKKF S M GY + +SDHCVFV++
Sbjct: 935 YMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDHCVFVNR 994
Query: 585 F 585
+
Sbjct: 995 Y 995
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 115/183 (62%), Gaps = 3/183 (1%)
Query: 103 LLQLPIEPTSYREAAKD---TECVKAMNEEYQALLDNKTWSLVPYNNHMNILGCKWVFKI 159
LL EP SY EA + + +AM EE +L N T+ LV + L +WV+++
Sbjct: 802 LLTDGGEPESYEEAMESDQKRQWFEAMQEEMNSLYVNDTFELVKAPKNRKALKNRWVYRV 861
Query: 160 MQKSDGTIERYKTRLVAKGFHQQEGVDYEKTFSPVVKANTIRIVLTIAVTNSWHIKQLDV 219
+ ++ R+K RLV KGF Q++G+D+++ FSPVVK ++IR+VL +A I+Q+DV
Sbjct: 862 KHEEGTSVPRFKARLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDV 921
Query: 220 SNAFIHGTLDEAVYMIQPPGFVQPEKDKHVCHLHKALFGLKQAPRAWFNKFANFLLAYRF 279
AF+HG LDE +YM QP GF K+ +VC L K+L+GLKQAPR W+ KF + + + +
Sbjct: 922 KTAFLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGY 981
Query: 280 KKS 282
KK+
Sbjct: 982 KKT 984