BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0580.1
(382 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN67403.1 hypothetical protein VITISV_025614 [Vitis vinifera] 239 7e-67
AAN06870.1 Putative gag-pol polyprotein [Oryza sativa Japonica G... 205 4e-55
CAN66625.1 hypothetical protein VITISV_032065 [Vitis vinifera] 194 4e-53
>CAN67403.1 hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 239 bits (609), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 138/384 (35%), Positives = 199/384 (51%), Gaps = 60/384 (15%)
Query: 2 RNFNNNSQNGRNFSSSSNQNQNKPNQGPRINNGDRPTCQICHKIGHTAAKCYHRIRFAYQ 61
++FNN +G+N S N + N G ++ RP CQ+C K GHT +CYHR +Q
Sbjct: 335 QHFNNKRSSGQNRQSGFNTRRGT-NGGRSQSSQHRPQCQLCGKFGHTVVRCYHRFDINFQ 393
Query: 62 GRNP------------PNNIAAMLASVNIFGENPWFADTGASHHIILDVSNIASSSSSYK 109
G NP N + AM+AS + + WF DTGA+HH+ + + S Y
Sbjct: 394 GYNPNMDTVQTNKPNAKNQVQAMMASPSTISDEAWFFDTGATHHLSQSIDPL-SDVQPYM 452
Query: 110 GKETVSAANGQGMIRTNTGNSSFMTKHNTFSLKNVLVVPQASHNLLSEKGISHQMTCAHT 169
G + V N SS++ H GI Q +C +T
Sbjct: 453 GNDKVIVGN---------AFSSYLATH----------------------GIKSQFSCPYT 481
Query: 170 PEQNGVAESKHRHLLDLTRTLLVQSSLSQSFWLEALHTTTYLVNRLPLQVLQSVSPLEKL 229
PEQNG AE K RH+++ LL +SL FWL A HTT +L+NRLP +VL SP + L
Sbjct: 482 PEQNGRAERKLRHIIETGLALLATASLPFKFWLYAFHTTIFLINRLPTKVLNYQSPFQIL 541
Query: 230 FYSPPDYDFLKVFGCACYPWLRPYVKNKLDPRSKECIFIGCAQNQKGYRCLDALTGKVYV 289
F P+Y K+FGC CYP++RPY KNKL RS +C+F+G + N KGY CL+ LTG++YV
Sbjct: 542 FGKSPNYHIFKIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYV 601
Query: 290 SRHVTFNESHFPLLVHQTTSSSPVPKLMSSPHSVISTIPIIPSPPIPHISTTPMSSPLEP 349
+RHV F+E+ FP S+P S++ IP+P S+ P+SS
Sbjct: 602 TRHVVFHETVFP--------------FQSTPDQS-SSVVTIPTPAFLPCSSPPVSSLRSH 646
Query: 350 TLSTLSAPLVPSLPTTPPNSPVIL 373
T + S+P + ++P++ + P ++
Sbjct: 647 TTPSTSSPPLTNMPSSTISLPDLI 670
>AAN06870.1 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
ABF94109.1 retrotransposon protein, putative, Ty1-copia
subclass [Oryza sativa Japonica Group]
Length = 1247
Score = 205 bits (522), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 113/322 (35%), Positives = 177/322 (54%), Gaps = 21/322 (6%)
Query: 36 RPTCQICHKIGHTAAKCYHRIRFAYQGRNPPNNIAAMLASVNIFGENPWFADTGASHHII 95
RP CQ+C+K GHT C++R Y P+ A A+ + + W+ DTGA+ H+
Sbjct: 276 RPKCQLCYKRGHTVINCWYR----YDEDFVPDEKYAGSAATSYGIDTNWYVDTGATDHVT 331
Query: 96 LDVSNIASSSSSYKGKETVSAANGQGMIRTNTGNSSFMTKHNTFSLKNVLVVP------- 148
++ + YKG + V A+G + + + F + +L +
Sbjct: 332 GELEKLIVRDH-YKGHDQVHTASGAVIQKFH----EFQALVERLFNRKILAMQSDWGGEY 386
Query: 149 QASHNLLSEKGISHQMTCAHTPEQNGVAESKHRHLLDLTRTLLVQSSLSQSFWLEALHTT 208
+ ++ ++ GI+H ++C HT +QNG AE KHRH++++ LL SS+ FW EA +
Sbjct: 387 EKLNSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEMGLALLAYSSMPLKFWDEAFTSA 446
Query: 209 TYLVNRLPLQVLQSVSPLEKLFYSPPDYDFLKVFGCACYPWLRPYVKNKLDPRSKECIFI 268
YL+NR P ++L+ +PLE+LF PDY+ L+VFGCAC+P LRPY KL RSK+C F+
Sbjct: 447 VYLINRTPSRLLKYATPLERLFKQTPDYNLLRVFGCACWPHLRPYNARKLQFRSKQCTFL 506
Query: 269 GCAQNQKGYRCLDALTGKVYVSRHVTFNESHFPLL-VHQTTSSSPVPKLMSSPHSVISTI 327
G + KG++CLD TG+VY+S V F+E+ FP +H + +++ P + I
Sbjct: 507 GYSPLHKGFKCLDPSTGRVYISHDVIFDENVFPFASLHPNAGAKLRSEILLLPSHL--DI 564
Query: 328 PIIPSPPIPHISTTPMSSPLEP 349
PIIP + +STT + P P
Sbjct: 565 PIIPG--VQQMSTTVANVPTNP 584
>CAN66625.1 hypothetical protein VITISV_032065 [Vitis vinifera]
Length = 555
Score = 194 bits (492), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 176/355 (49%), Gaps = 43/355 (12%)
Query: 5 NNNSQNGRNFSSSSNQNQNKPNQGPRINNGDRPTCQICHKIGHTAAKCYHRIRFAYQGRN 64
N N+ + R + SSN N+ + P NN IC GH A +C R N
Sbjct: 204 NRNTTSWRPSTHSSN-NRTDWHPSPNTNNRSPAFPNICGIQGHIAKRC-SSFRLVPNQPN 261
Query: 65 -----PPNNI------AAMLASVNIFGENPWFADTGASHHIILDVSNIASSSSSYKGKET 113
P NN A A+ I W D+GASHH+I D+SN+ S + Y G +
Sbjct: 262 TTPVAPVNNTLTPWQPRAHFATNTIPSTPQWLLDSGASHHVIADLSNL-SLHTPYTGSDD 320
Query: 114 VSAANGQGMIRTNTGNSSFMTKHNTFSL------KNVLVVPQAS---------HNLLSEK 158
+ +G + T+TG+ SF T + +F L K+VL+ +A H L S+
Sbjct: 321 IMIGDGSSLPITHTGSISFTTHNTSFKLDNKSEVKDVLIXFKAIVETHFQKKIHTLYSDN 380
Query: 159 G--------------ISHQMTCAHTPEQNGVAESKHRHLLDLTRTLLVQSSLSQSFWLEA 204
G I+H T HTPE NG +E +HRH+++ TLL +SL +FW
Sbjct: 381 GGEYLALQTFLITHGITHLTTLPHTPEHNGYSERRHRHIVETGLTLLSHASLPLTFWTHV 440
Query: 205 LHTTTYLVNRLPLQVLQSVSPLEKLFYSPPDYDFLKVFGCACYPWLRPYVKNKLDPRSKE 264
TT YL+NR P L SP E F SPP+Y L++FGC CYPWLRPY +KL+ RSK
Sbjct: 441 FATTVYLINRKPTLTLNLSSPYENFFGSPPNYSKLRIFGCLCYPWLRPYSSHKLESRSKP 500
Query: 265 CIFIGCAQNQKGYRCLDALTGKVYVSRHVTFNESHFPLLVHQTTSSSPVPKLMSS 319
CIF+G + Q Y T ++YVSRH+ F ES FP L S+ P P +S+
Sbjct: 501 CIFLGYSLTQSAYLYYHPPTSRMYVSRHIKFVESVFPSLNLSMPSTCPQPDTVST 555