BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0720.1
(185 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDP10580.1 unnamed protein product [Coffea canephora] 208 5e-66
XP_010263056.1 PREDICTED: RING-H2 finger protein ATL70-like [Nel... 204 1e-64
XP_009348829.1 PREDICTED: RING-H2 finger protein ATL70-like [Pyr... 202 1e-63
>CDP10580.1 unnamed protein product [Coffea canephora]
Length = 169
Score = 208 bits (529), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 109/184 (59%), Positives = 126/184 (68%), Gaps = 19/184 (10%)
Query: 1 MNSTNFDTGGGFLSDKIGGFGYGICVSIGILFLITTITLTSYYCSRASNVVTSPSPPPSA 60
MN+T GG S IGG GYGI VS+GIL LITTITL SYYC+R S V +P
Sbjct: 1 MNATETSPGGFMGSGNIGGLGYGIGVSVGILVLITTITLASYYCTRRSATVVAP------ 54
Query: 61 SPSIHAHRHRHRRDRQHTIDIHH-EEEKGLDEATLKTYPKLLYSQAKKLHHKKETTTNSC 119
R +Q D H E GLDEATL +YP++LYS+AK K +T SC
Sbjct: 55 ---------LQRNPQQDPADPRHLVVEVGLDEATLLSYPEMLYSEAKV---KNNDSTGSC 102
Query: 120 CSICLADYKSTDTLRLLPDCYHLFHLKCVDPWLRLHPTCPVCRTTPVPSPMSTPLAEVVP 179
CSICLADYK+TD LRLLPDC HLFHLKCVDPWLR HPTCPVCRT+P+P+P+STPLAEV P
Sbjct: 103 CSICLADYKNTDMLRLLPDCGHLFHLKCVDPWLRQHPTCPVCRTSPLPTPLSTPLAEVAP 162
Query: 180 LSSR 183
L++R
Sbjct: 163 LATR 166
>XP_010263056.1 PREDICTED: RING-H2 finger protein ATL70-like [Nelumbo nucifera]
Length = 169
Score = 204 bits (520), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 127/184 (69%), Gaps = 18/184 (9%)
Query: 1 MNSTNFDTGGGFLSDK-IGGFGYGICVSIGILFLITTITLTSYYCSRASNVVTSPSPPPS 59
MNST+ G L K IG FGYGI +S+GIL ITTITL SY+C+ + +S P
Sbjct: 1 MNSTDPSPNNGLLGAKNIGAFGYGIGISVGILLAITTITLASYFCTHNDQMPSSDQP--- 57
Query: 60 ASPSIHAHRHRHRRDRQHTIDIHHEEEKGLDEATLKTYPKLLYSQAKKLHHKKETTTNSC 119
R +R QHT+ I E+G+D ATL +YPKLLYSQAK + +T SC
Sbjct: 58 -------QRRSAQRSGQHTVTI----EEGVDAATLLSYPKLLYSQAKL---RSNDSTASC 103
Query: 120 CSICLADYKSTDTLRLLPDCYHLFHLKCVDPWLRLHPTCPVCRTTPVPSPMSTPLAEVVP 179
CSICLADYK+TD LRLLP C HLFHL CVDPWLRL PTCPVCRT+P+P+P+STPLAEVVP
Sbjct: 104 CSICLADYKNTDVLRLLPGCGHLFHLNCVDPWLRLRPTCPVCRTSPIPTPLSTPLAEVVP 163
Query: 180 LSSR 183
L+SR
Sbjct: 164 LASR 167
>XP_009348829.1 PREDICTED: RING-H2 finger protein ATL70-like [Pyrus x
bretschneideri]
Length = 169
Score = 202 bits (514), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 134/187 (71%), Gaps = 24/187 (12%)
Query: 1 MNSTNFDTGGGFLSDKIGGFGYGICVSIGILFLITTITLTSYYCSRASNVVTSPSPPPSA 60
MN+T+ D+GG S+ IG FGYGI VS+G+L LITTITL SY+C+R P+PP
Sbjct: 1 MNATS-DSGGFLGSNNIGSFGYGIGVSVGVLLLITTITLASYFCARTQQ---PPAPP--- 53
Query: 61 SPSIHAHRHRHRRDRQHTIDIHHEE----EKGLDEATLKTYPKLLYSQAKKLHHKKETTT 116
RR+ +D E + GLD+ T+++YPKLLYS+AK + + +T
Sbjct: 54 ----------TRRNAGDAMDPPGVENFVVDIGLDDNTIQSYPKLLYSEAK---LQMKDST 100
Query: 117 NSCCSICLADYKSTDTLRLLPDCYHLFHLKCVDPWLRLHPTCPVCRTTPVPSPMSTPLAE 176
SCCSICLADYK++D LRLLPDC HLFHLKC+DPWLRL+PTCPVCRT+P+P+P+STPLAE
Sbjct: 101 ASCCSICLADYKNSDMLRLLPDCRHLFHLKCIDPWLRLNPTCPVCRTSPIPTPLSTPLAE 160
Query: 177 VVPLSSR 183
VVPL+SR
Sbjct: 161 VVPLASR 167