BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0760.1
(122 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_016181695.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 167 4e-49
XP_015946282.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 166 8e-49
XP_012828754.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplasti... 166 1e-48
>XP_016181695.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Arachis
ipaensis]
Length = 309
Score = 167 bits (423), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 98/120 (81%), Gaps = 3/120 (2%)
Query: 1 MGPKIRGSYRGFVDSPYKIYAGNLGWNLTSEGLKDTFADRPGLLGAKVIYDRNSGKARGF 60
MGPKIR + RGFVDSP+K+YAGNLGW LTSEGL+D FA++PGLL AKVIY+R+SG++RGF
Sbjct: 193 MGPKIRNNSRGFVDSPHKLYAGNLGWRLTSEGLRDAFAEQPGLLSAKVIYERDSGRSRGF 252
Query: 61 GFVTFSSAEDAQAAIDALNGVEVEGRPLRLNLAAEKANNFTSRPARQTEDFHENAVEAST 120
GFVTF +AED +AA++A+NGVE+EGRPLRLNLAAE+A S P R D E AST
Sbjct: 253 GFVTFQTAEDVEAALNAMNGVEIEGRPLRLNLAAERA---PSSPPRSNVDSSELYSSAST 309
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 18 KIYAGNLGWNLTSEGLKDTFADRPGLLGAKVIYDRNSGKARGFGFVTFSSAEDAQAAIDA 77
++Y GNL +++TS L + F + ++ +V+YDR + ++RGF FVT S DAQ AI
Sbjct: 107 RLYVGNLPYSMTSNELSELFGEAGTVVSVEVVYDRVTDRSRGFAFVTMGSVGDAQEAIRM 166
Query: 78 LNGVEVEGRPLRLNL 92
+G +V GR +++N
Sbjct: 167 FDGSQVGGRTVKVNF 181
>XP_015946282.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Arachis
duranensis]
Length = 303
Score = 166 bits (420), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 80/120 (66%), Positives = 98/120 (81%), Gaps = 3/120 (2%)
Query: 1 MGPKIRGSYRGFVDSPYKIYAGNLGWNLTSEGLKDTFADRPGLLGAKVIYDRNSGKARGF 60
MGP+IR + RGFVDSP+K+YAGNLGW LTSEGL+D FA++PGLL AKVIY+R+SG++RGF
Sbjct: 187 MGPRIRNNSRGFVDSPHKLYAGNLGWRLTSEGLRDAFAEKPGLLSAKVIYERDSGRSRGF 246
Query: 61 GFVTFSSAEDAQAAIDALNGVEVEGRPLRLNLAAEKANNFTSRPARQTEDFHENAVEAST 120
GFVTF +AED +AA++A+NGVE+EGRPLRLNLAAE+A S P R D E AST
Sbjct: 247 GFVTFQTAEDVEAALNAMNGVEIEGRPLRLNLAAERA---PSSPPRSNVDSSELYSRAST 303
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 48/75 (64%)
Query: 18 KIYAGNLGWNLTSEGLKDTFADRPGLLGAKVIYDRNSGKARGFGFVTFSSAEDAQAAIDA 77
++Y GNL +++TS L + F + ++ +V+YDR + ++RGF FVT S DAQ AI
Sbjct: 101 RLYVGNLPYSMTSNELSELFGEAGTVVSVEVVYDRVTDRSRGFAFVTMGSVGDAQEAIRM 160
Query: 78 LNGVEVEGRPLRLNL 92
+G +V GR +++N
Sbjct: 161 FDGSQVGGRTVKVNF 175
>XP_012828754.1 PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Erythranthe
guttata] EYU18105.1 hypothetical protein
MIMGU_mgv1a009876mg [Erythranthe guttata]
Length = 328
Score = 166 bits (421), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 98/118 (83%), Gaps = 2/118 (1%)
Query: 1 MGPKIRGSYRGFVDSPYKIYAGNLGWNLTSEGLKDTFADRPGLLGAKVIYDRNSGKARGF 60
M PKIR SY+GFVDSPYKIYAGNL WNLTS+ L+DTF+ +PG L AKVIYDR+SG++RGF
Sbjct: 203 MSPKIRSSYQGFVDSPYKIYAGNLSWNLTSQILRDTFSQQPGFLSAKVIYDRDSGRSRGF 262
Query: 61 GFVTFSSAEDAQAAIDALNGVEVEGRPLRLNLAAEKANNFTSRPARQTEDFHENAVEA 118
GF+TFSSAED Q+A+DALNG+E+EGRPLRLNL+ ++A +S P E+ +N +E+
Sbjct: 263 GFITFSSAEDVQSAMDALNGLELEGRPLRLNLSEQRAPAASSSP--DVENATDNNLES 318
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%)
Query: 18 KIYAGNLGWNLTSEGLKDTFADRPGLLGAKVIYDRNSGKARGFGFVTFSSAEDAQAAIDA 77
++YAGNL +++TS L + FA+ ++ +++YDR + ++RGF FVT S E+A+ AI
Sbjct: 117 RLYAGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRL 176
Query: 78 LNGVEVEGRPLRLNL 92
+G ++ GR ++N+
Sbjct: 177 FDGAQIGGRTAKVNI 191