BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0860.1
(520 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_008245529.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized p... 209 9e-55
XP_009113843.1 PREDICTED: putative ribonuclease H protein At1g65... 205 6e-54
XP_010058710.1 PREDICTED: uncharacterized protein LOC104446568 [... 203 9e-53
>XP_008245529.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103343662
[Prunus mume]
Length = 1725
Score = 209 bits (531), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 234/520 (45%), Gaps = 44/520 (8%)
Query: 1 MQCFAIPKGISNRIETIQRSFWWGKAKS---IHTINWAAICRPRKLGGLGLRNPILDNEA 57
M F P G I++I +FWWG+++ IH I+W + P+ GG+G RN N A
Sbjct: 829 MSVFLFPNGFCQEIDSILANFWWGQSQQSNKIHWISWKDLGMPKNEGGMGFRNLKDFNVA 888
Query: 58 FLCKLGWRLLKFLDAPWAQLLKAKYFPKSAKPPSPKQNHSR-VWKSLAEPIRKTSNLIFW 116
L K GWR++ A WAQLLK+KYFP + K S W SL N W
Sbjct: 889 LLAKQGWRMVTEPQAFWAQLLKSKYFPNCDFLRAGKGAKSSWAWSSLLVGRNIIMNGARW 948
Query: 117 DVNIGTKISIWDDFWIPN---HKPPIPNLNNCPFNTVNQLISNNY---WNEELLQIYFNE 170
V G+++ +W D WIP H +L+ + I + + WN E + F+
Sbjct: 949 QVLDGSRVHLWTDKWIPGCTEHALQPSHLSQVDLEAKVETIIDCHSREWNLEAIGGMFSP 1008
Query: 171 EICRAILSINLHPSAE-DAMVWTLTNSGNFTIKSMYRYLSNGNRDS----------DTIE 219
+ I ++ L E D ++W L +G++T+KS Y + + D+ D
Sbjct: 1009 NAAKIIKAMPLGDGWEKDRLIWPLNQTGSYTVKSGYNMIHMAHLDTSVRPSSSRILDKAL 1068
Query: 220 WSFIWNIRTIPRIKLFLWKCCTNSLPVKEKI-GKYIGNSYRCAFCEE-RETLSHVLLNCN 277
W IW + +P++ F W+ LP ++ + +++G S C C E E++ H+ L CN
Sbjct: 1069 WKLIWGSQMVPKLMNFWWRLVRGCLPTRDALFRRHLGTSPLCPICGEFPESVEHLFLLCN 1128
Query: 278 FARAIWF----HYNIRTDGIVSVRDWIM----FWSSLDDTTMALLAKIM---WFIWKARC 326
+ R +WF +Y I I S+ DW+M F L L+++I W IWK+RC
Sbjct: 1129 WVRPVWFGGPLNYRINRQSITSMSDWLMQILKFSQGLGYDRKWLISQIFYSCWSIWKSRC 1188
Query: 327 DQCFGKKDIVPMQIIRNIQCYTTSFHDDRSPKSEIIPP----------KWLPPPHSFLKI 376
F + P + + F+ P + I +W PPP S KI
Sbjct: 1189 SAIFDDISVCPRNTLLVAKKLMNDFNLVGCPHGDAILEEDIDDGHRVVRWSPPPTSVYKI 1248
Query: 377 NVDASFSKFTDPAGIGCIIHDENGDFIIAKAEPIRGQTAEECECLAILIAVQWAEELKIS 436
N+DAS+ T AG+G ++ + G F+ P +A E E A L V+ A E
Sbjct: 1249 NIDASWVSCTLQAGLGVVVRNSAGIFMGGCCGPRLASSAIEAEAHAALKGVKLAVERGFP 1308
Query: 437 HLIIESDNSNLINHIQDKKKDISWQSLHHMEQIRARRTNF 476
+++ ESD+ L+ ++ W + IR ++F
Sbjct: 1309 NVVFESDSKELVQSVKGNILKGRWMIYPILSAIRRHCSSF 1348
>XP_009113843.1 PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
rapa]
Length = 896
Score = 205 bits (521), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 256/544 (47%), Gaps = 58/544 (10%)
Query: 1 MQCFAIPKGISNRIETIQRSFWWGKA---KSIHTINWAAICRPRKLGGLGLRNPILDNEA 57
M F +PK + + I FWWGK+ K +H W + P+K GG+G R+ N+A
Sbjct: 334 MNVFKMPKKVCDDINNTLAQFWWGKSDGSKGMHWFAWQRMSLPKKEGGMGFRDFEKFNDA 393
Query: 58 FLCKLGWRLLKFLDAPWAQLLKAKYFPKS--AKPPSPKQNHSRVWKSLAEPIRKTSNLIF 115
L K WR+L ++ A++LK KYFP S K + KQ+ S +W SL +
Sbjct: 394 LLAKQVWRILIKPNSLMARVLKGKYFPNSNILKAGTKKQS-SYIWNSLLHGQALLKRGLR 452
Query: 116 WDVNIGTKISIWDDFWIPNHKP--PIPNLNNCPFNTVNQLISNNY--WNEELLQIYFNEE 171
+ + G +S+W D W+P P PIP + P V++L+ N WNEEL++ E
Sbjct: 453 FIIGNGESVSLWADPWLPTSPPRSPIPKDQSNPMTKVSELMKQNQTGWNEELIRHTIVEA 512
Query: 172 ICRAILSINLHPSAE-DAMVWTLTNSGNFTIKSMYRYLSNGNRD-------SDTIEWSFI 223
ILS+ L A+ D +VW SG +++KS Y ++ +D I + I
Sbjct: 513 DAEEILSMKLCAYADTDPLVWHYNKSGEYSVKSGYWLATHDPQDLPIEPPPGSIILKNMI 572
Query: 224 WNIRTIPRIKLFLWKCCTNSLPVKEKIG-KYIGNSYRCAFCEERETLSHVLLNCNFARAI 282
W + T P+++ FLWK T+SLP+ + +++ S +C C++ ET H+ C +A+ I
Sbjct: 573 WKLPTAPKLQHFLWKMVTSSLPLGSNLQRRHVTTSVKCPHCQQEETTEHLFFECFYAQRI 632
Query: 283 WFHYNIRTDGIVSVRDWIMFWSSLDDTTMALLAK--------------IMWFIWKARCDQ 328
W R G+ + S+L+D MALL K I+W IWK R
Sbjct: 633 W-----RASGLPH-NIFYQAQSTLEDKLMALLQKIPNLPDHLRHLPWWILWRIWKCRNKM 686
Query: 329 CFGKKDIVPMQIIRN--------IQCYTTSFHD-DRSP---KSEIIPPKWLPPPHSFLKI 376
F + I +++ ++ Y + D DR E KW PP F+K
Sbjct: 687 IFQQTSIHWRTTLQSAYFDTKEWLEAYQSVDKDEDRQGLRRDMEHQRNKWTKPPTGFVKC 746
Query: 377 NVDASFSKFTDPAGIGCIIHDENGDFI-IAKAEPIRGQTAEECECLAILIAVQ--WAEEL 433
N D +F+ G II D+ G F A A + TA E E A+L+A+ W++
Sbjct: 747 NYDGAFNNIQRETKAGWIIRDDMGRFKGAAHASNQQPTTALEGELQALLLAMMNCWSKGY 806
Query: 434 KISHLIIESDNSNLINHIQDKKKDISWQSLHHMEQIRARRTNFEQIQFQYGSRKINILAD 493
K H+I E DN N++ + +I + + I FE+I+F + +R N+ AD
Sbjct: 807 K--HVIFEGDNINVMKLANGESTNID--VTNWIRDIWRWPAKFEEIKFCWTNRNSNLCAD 862
Query: 494 TLAK 497
LAK
Sbjct: 863 ILAK 866
>XP_010058710.1 PREDICTED: uncharacterized protein LOC104446568 [Eucalyptus grandis]
Length = 1356
Score = 203 bits (516), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 146/531 (27%), Positives = 247/531 (46%), Gaps = 44/531 (8%)
Query: 1 MQCFAIPKGISNRIETIQRSFWWGKAKS---IHTINWAAICRPRKLGGLGLRNPILDNEA 57
M F +P + IE +FWW K S IH NW+ + + GG+G R+ I N A
Sbjct: 832 MSLFKLPLSLCRLIERKISAFWWSKHNSHSGIHWKNWSELKLSKVSGGMGFRDLINFNTA 891
Query: 58 FLCKLGWRLLKFLDAPWAQLLKAKYFPKSAKPPSPKQNH-SRVWKSLAEPIRKTSNLIFW 116
L K WRLL+ A W+QL K YF S+ +P + S W+SL + + + W
Sbjct: 892 MLGKQAWRLLQQPQAIWSQLFKGLYFRYSSFQTAPSGHRPSWGWQSLLKGREAITPKLRW 951
Query: 117 DVNIGTKISIWDDFWIPNHKPPIPNLNNCPFNTVNQLISN------NYWNEELLQIYFNE 170
V G++I I +D W+ PI + P +L++N + W L+ +FN
Sbjct: 952 LVGDGSQIHIREDNWL-----PIGPIGGLPEEGEPELVANLIDLQHSEWKSSLVTAFFNV 1006
Query: 171 EICRAILSINLHPS-AEDAMVWTLTNSGNFTIKSMYRYLS----------NGNRDSDTIE 219
++ AIL+ ++PS D +VWT T SG + +KS Y YLS + + + +
Sbjct: 1007 QVSAAILNTPINPSLLHDQLVWTETPSGTYIVKSCYYYLSLQYQQPTHKPSSSYTNPPLL 1066
Query: 220 WSFIWNIRTIPRIKLFLWKCCTNSLPVKEKI-GKYIGNSYRCAFCEER--ETLSHVLLNC 276
W IW++ T P+I++FLW C N++ + + ++I C+ C E++ H+ C
Sbjct: 1067 WRKIWHMCTAPKIRVFLWLACKNAIATQHNLYQRHIIPHPYCSLCNNSVPESIEHLFFFC 1126
Query: 277 NFARAIWFHYNIRTD----GIVSVRDWIMFWSSLDDTT--MALLAKIMWFIWKARCDQCF 330
+ IW H IR + WI+ +SL + ++A I+W IW+ R + F
Sbjct: 1127 PWTNDIWNHEEIRVKISPTSVSRFDAWIVDRASLPQASPEFEVVAHILWEIWRQRNNAVF 1186
Query: 331 GKKDIVPMQIIRNIQCYTTSFHDDRSPKSEI------IPPKWLPPPHSFLKINVDASFSK 384
+ P+Q++ + TT F + +I + +W PP ++K N+D ++ K
Sbjct: 1187 RQIPPDPLQVVNDALTQTTIFKVLQPSPQKIKNKLVSLEQRWKPPAEGYIKCNIDGAYRK 1246
Query: 385 FTDPAGIGCIIHDENGDFIIAKAEPIRGQTAEECECLAILIAVQW--AEELKISHLIIES 442
++ I CI D G + Q+A + E A++ A+QW + L++ + +IES
Sbjct: 1247 ESETGTITCIYRDSKGILTDVHTRSVPAQSAFQAEIYALISALQWLIQQGLQLQYFVIES 1306
Query: 443 DNSNLINHIQDKKKDISWQSLHHMEQIRARRTNFEQIQFQYGSRKINILAD 493
D L+ ++ K + W H + + Q+ R+ N+ AD
Sbjct: 1307 DCLKLVEIVRTKLRP-PWMERHLFAILSKLLPQCPNLLLQHVRRQANLAAD 1356