BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0870.1
(293 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010039376.1 PREDICTED: uncharacterized protein LOC104428079 [... 99 2e-19
XP_010673168.1 PREDICTED: uncharacterized protein LOC104889608 [... 92 3e-17
XP_013639767.1 PREDICTED: uncharacterized protein LOC106345041 [... 92 4e-17
>XP_010039376.1 PREDICTED: uncharacterized protein LOC104428079 [Eucalyptus grandis]
Length = 1343
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 149/369 (40%), Gaps = 86/369 (23%)
Query: 3 WDINLINNCFNSDICSAIVIIDL-QIGKEDTAKWTLTKSGNFTIKSMYNYLR-------- 53
W++ L+N F+ I + I+ + + K+D WT SG +T+KS YN +
Sbjct: 934 WNVPLLNQLFDQKIVNEILTLPIVHQQKDDKLIWTGNHSGQYTVKSGYNMINDVSLPQEC 993
Query: 54 -TGSSGPMHDQNDWFFIWNMNTIPRIKLFLWKCCTNSLPVKEKI-GKYIGNSYSCINCME 111
SS ++ W +W+M+ P++++FLW C ++LP KEK+ + I C C +
Sbjct: 994 NRASSSYQPPRSLWTKLWHMSIPPKLRIFLWSLCQDALPTKEKLHQRKILPDPLCPLCSK 1053
Query: 112 -NETLDHVMLHCNYARAIWFTFQMVARINNTSTTPL------------------------ 146
ET++H+ LHC + IW ++ +S T +
Sbjct: 1054 YPETVEHIFLHCQQVKKIWSDPRLNISHVTSSATRMDKWVAEYLLVKTQASDPELIVEVL 1113
Query: 147 -----NLESIITNKCRGKPK------------QHKWSP------------------PSTP 171
N + I K G+P+ +W P P TP
Sbjct: 1114 WQIWKNRNNFIFRKTHGQPQALIDTALAQNRVSQRWIPTKSSKSKGNEHLPVTWKAPKTP 1173
Query: 172 YPKINVDASFTTLSEQAVIGCITHDAEANFIITAADSVRGQNAEECENLAIHYSLLRAIE 231
K+NVD+S+ + + D+ + I A+ V + + E LA+ + L + E
Sbjct: 1174 DLKLNVDSSWIATDSACSVAGLLRDSNGSVIDGFAEEVHAASPLQAETLALFHGLKKLEE 1233
Query: 232 LRIQYVHIG------------SDNQNLIQYINGKSDGLHWQSKKVIEQTIALKAQFTDIV 279
+ H+G SD + L+ ++ G+ + W + +++ + AQ +
Sbjct: 1234 WKT--THVGQTPELNRTLTCESDCRQLVDFVLGREEA-SWAVQLQVQECQNILAQLPLVT 1290
Query: 280 FSYAPRECN 288
S+ PRE N
Sbjct: 1291 ISFCPREAN 1299
>XP_010673168.1 PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris subsp.
vulgaris]
Length = 1712
Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 1 MPWDINLINNCFNSDICSAIVIIDL-QIGKEDTAKWTLTKSGNFTIKSMYNYLRTGSSGP 59
M WD N++N FN AI+ + L + D W TK G +++K+ Y ++ +
Sbjct: 1329 MEWDANVVNELFNEQDIQAILAVPLSERLPHDRVAWAFTKDGRYSVKTAYMVGKSRNLDL 1388
Query: 60 MHDQNDWFFIWNMNTIPRIKLFLWKCCTNSLPVKEKIG-KYIGNSYSCINCMEN-ETLDH 117
H W IW + P+++ FLWK C+NSLPV+ + ++I + +C C+E ET+ H
Sbjct: 1389 FH--RAWVTIWGLQVSPKVRHFLWKICSNSLPVRAILKHRHITSDDTCPLCLEGPETISH 1446
Query: 118 VMLHCNYARAIWFTFQMVARINN 140
+LHC+ R +W + +++ N
Sbjct: 1447 ALLHCSKVREVWEMAGLTSKLPN 1469
>XP_013639767.1 PREDICTED: uncharacterized protein LOC106345041 [Brassica oleracea
var. oleracea]
Length = 1481
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 40/292 (13%)
Query: 3 WDINLINNCFNSDICSAIVIID-LQIGKEDTAKWTLTKSGNFTIKSMYNYLRTGSSGPMH 61
W+++++N F ++ +I I +DT W TK+ ++ +KS Y +++T
Sbjct: 1118 WNMDMLNVLFTEEVKHSITSIRPAGTNSKDTYVWEFTKTWHYIVKSGY-WVQTSILALPK 1176
Query: 62 DQND---------WFFIWNMNTIPRIKLFLWKCCTNSLPVKEKIG-KYIGNSYSCINC-M 110
DQ + +W + IP+IK FLW+C N+LPV E + ++IG SC C
Sbjct: 1177 DQQAVVQPSLDSIYQMVWRLEKIPKIKHFLWRCLNNALPVAENMTYRHIGKEKSCCRCGG 1236
Query: 111 ENETLDHVMLHCNYARAIWFTFQM---------VARINNTSTTPL--------------N 147
E E+++H++ C+YAR IW + V T + N
Sbjct: 1237 EAESVNHLLFQCHYARMIWAVANVHIPPAGHWNVLLFRGTDYDAISTIQKSWDGVWERRN 1296
Query: 148 LESIITNKCRG---KPKQHKWSPPSTPYPKINVDASFTTLSEQAVIGCITHDAEANFIIT 204
+ +I + + + + KW+PP+ K N DAS++ + +G I D + +
Sbjct: 1297 RDEVIKEEVKVTTIEEPEKKWTPPAPASLKCNTDASWSKETMIGGVGLILRDHQGLLLWA 1356
Query: 205 AADSV-RGQNAEECENLAIHYSLLRAIELRIQYVHIGSDNQNLIQYINGKSD 255
A + ++ E E AI +++ + + V I +D+ L + +NG+ +
Sbjct: 1357 GARKLPMMRSVIETEAEAISWAIQTLVGFGYKTVIIETDSLVLARMLNGEEE 1408