BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0880.1
(144 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 119 2e-30
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 119 1e-28
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN... 107 2e-25
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 119 bits (299), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 92/138 (66%), Gaps = 8/138 (5%)
Query: 1 MEEGSSIQEYVNKFDKIISDLKDIDVKVEDEDRALILLLSLPKSYENLVQTLIIIGDSLS 60
M EG+S+ ++++F+++I DLK+IDVK+EDED ALILL LP SYEN V T++ D+L+
Sbjct: 114 MSEGTSVNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLT 173
Query: 61 MEETRNSLLADDLRKVATSGMTSGGV-DKDQAQGLFATRRRSNERGKGKGGKSRGSFKKT 119
E+ R L + +L+K GG+ +++QA+GL R R E+G K GKSR KT
Sbjct: 174 FEDVRAYLNSKELKKKV------GGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAK-GKT 226
Query: 120 CFSCGELGHFKAACPKRK 137
C++CG+ GHF+ C K K
Sbjct: 227 CWNCGQKGHFRQDCTKFK 244
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 119 bits (298), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 92/138 (66%), Gaps = 8/138 (5%)
Query: 1 MEEGSSIQEYVNKFDKIISDLKDIDVKVEDEDRALILLLSLPKSYENLVQTLIIIGDSLS 60
M EG+S+ ++++F+++I DLK+IDVK+EDED ALILL LP SYEN V T++ D+L+
Sbjct: 236 MSEGTSVNTHIDEFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLT 295
Query: 61 MEETRNSLLADDLRKVATSGMTSGGV-DKDQAQGLFATRRRSNERGKGKGGKSRGSFKKT 119
E+ R SL +L+K GG+ +++QA+GL R R E+G + GKSR KT
Sbjct: 296 FEDVRASLNFKELKKKV------GGIRNENQAEGLVVNRGRGKEKGLDRKGKSRAK-GKT 348
Query: 120 CFSCGELGHFKAACPKRK 137
C++CG+ GHF+ C K K
Sbjct: 349 CWNCGQKGHFRQDCTKFK 366
>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 107 bits (268), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 92/146 (63%), Gaps = 9/146 (6%)
Query: 1 MEEGSSIQEYVNKFDKIISDLKDIDVKVEDEDRALILLLSLPKSYENLVQTLIIIGDSLS 60
MEEGSSI+E+V+ F K + DLK +DV++++ED+A++LL SLP S+ENLV T++ D+L+
Sbjct: 111 MEEGSSIKEHVSLFTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLT 170
Query: 61 MEETRNSLLADDLRKVATSGMTSGGVDKDQAQGLFATRRRSNERGKGKGGKSRGSFK--K 118
+EE + +L + +L+K T GG + L A R R +R K R +K K
Sbjct: 171 LEEVKATLNSRELKKKITENKGEGG----DPEALMA-RGRLEKRDSKSKNKRRSKYKNEK 225
Query: 119 TCFSCGELGHFKAACPKRKLKQKNEG 144
C+ C + GHF+ CP+R K+KN G
Sbjct: 226 ACYYCKKEGHFRKECPER--KKKNNG 249