BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g0950.1
(389 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica... 145 1e-34
EEC72938.1 hypothetical protein OsI_06800 [Oryza sativa Indica G... 142 5e-34
EEC68887.1 hypothetical protein OsI_37529 [Oryza sativa Indica G... 144 5e-34
>AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica Group]
AAP54636.1 retrotransposon protein, putative,
unclassified [Oryza sativa Japonica Group]
Length = 791
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 132/229 (57%), Gaps = 4/229 (1%)
Query: 1 MGLSLLPQGTLNQLEKLERNFWWDHNENERRMHFLPWECINKPKELGGLGVRKLSKVNQS 60
MG+ LP+ ++ L KL +NFWWD +R+ H+ W+ + KPK LGGLG R NQ+
Sbjct: 215 MGIFKLPESVIDDLTKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYWLFNQA 274
Query: 61 LVAKIAWRLLVHPNTTWANIISAKYYRGVTFWDAQNKSNATPLWKALIHVKDTLRSRVCW 120
L+A+ AWRL+ +P++ A ++ AKY+ + D SN++P W+++ + D L+ + W
Sbjct: 275 LLARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIW 334
Query: 121 QVG-GSTLKILQDPWIPNAPSFKPTFREQLPENIYWVSDLIDHTSNKWKLDIIQRYCTEE 179
+VG G++++I +DPW+P S +P + + WVSDLI + W + I +Y
Sbjct: 335 RVGNGNSIRIWRDPWLPRDHSRRP-ITGKANCRLKWVSDLITEDGS-WDVPKIHQYFHNL 392
Query: 180 SAKFIYEINLSRLMVVDRLIWVPTENGQFTTKSFFKEISSYLPNARASA 228
A+ I I +S D + W P +NG F+ +S ++ +++ L N S+
Sbjct: 393 DAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYR-LAAQLVNIEESS 440
>EEC72938.1 hypothetical protein OsI_06800 [Oryza sativa Indica Group]
Length = 556
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 3/215 (1%)
Query: 1 MGLSLLPQGTLNQLEKLERNFWWDHNENERRMHFLPWECINKPKELGGLGVRKLSKVNQS 60
MGL LP+ +L KL RNFWW + +RR H+ W+C+ K GG+G R NQ+
Sbjct: 212 MGLFKLPESVYEELTKLVRNFWWGAEKGKRRTHWKSWDCLIARKLKGGMGFRDFRLFNQA 271
Query: 61 LVAKIAWRLLVHPNTTWANIISAKYYRGVTFWDAQNKSNATPLWKALIHVKDTLRSRVCW 120
L+A+ AWRLL P++ A I+ AKYY + D NA+P W+A+ + + L+ + W
Sbjct: 272 LLARQAWRLLDRPDSLCARILKAKYYPNGSLIDTSFGGNASPGWRAIEYGLELLKKGIIW 331
Query: 121 QVG-GSTLKILQDPWIPNAPSFKPTFREQLPENIYWVSDLIDHTSNKWKLDIIQRYCTEE 179
++G G ++++ +DPWIP + S +P ++ + WVSDLID S W D I ++
Sbjct: 332 RIGNGKSVRLWRDPWIPRSFSRRPISAKR-NCRLRWVSDLIDQ-SESWDTDKISQHFLPM 389
Query: 180 SAKFIYEINLSRLMVVDRLIWVPTENGQFTTKSFF 214
A+ I I LS + D + W P G+F+ +S +
Sbjct: 390 DAEAILNIRLSSRLEDDFIAWHPDRLGRFSVRSAY 424
>EEC68887.1 hypothetical protein OsI_37529 [Oryza sativa Indica Group]
Length = 1765
Score = 144 bits (363), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 131/229 (57%), Gaps = 4/229 (1%)
Query: 1 MGLSLLPQGTLNQLEKLERNFWWDHNENERRMHFLPWECINKPKELGGLGVRKLSKVNQS 60
MG+ LP+ ++ L KL +NFWWD +R+ H+ W+ + KPK LGGLG R NQ+
Sbjct: 1262 MGIFKLPESVIDDLTKLTKNFWWDSMNGQRKTHWKAWDSLTKPKSLGGLGFRDYRLFNQA 1321
Query: 61 LVAKIAWRLLVHPNTTWANIISAKYYRGVTFWDAQNKSNATPLWKALIHVKDTLRSRVCW 120
L+A+ AWRL+ +P++ A ++ AKY+ + D SN++P W+++ + D L+ + W
Sbjct: 1322 LLARQAWRLITYPDSLCARVLKAKYFPHGSLIDTSFGSNSSPAWRSIEYGLDLLKKGIIW 1381
Query: 121 QVG-GSTLKILQDPWIPNAPSFKPTFREQLPENIYWVSDLIDHTSNKWKLDIIQRYCTEE 179
+VG G++++I +D W+P S +P + + WVSDLI + W + I +Y
Sbjct: 1382 RVGNGNSIRIWRDSWLPRDHSRRP-ITGKANCRLKWVSDLITEDGS-WDVPKIHQYFHNL 1439
Query: 180 SAKFIYEINLSRLMVVDRLIWVPTENGQFTTKSFFKEISSYLPNARASA 228
A+ I I +S D + W P +NG F+ +S ++ +++ L N S+
Sbjct: 1440 DAEVILNICISSRSEEDFIAWHPDKNGMFSVRSAYR-LAAQLVNIEESS 1487