BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000108.1_g1070.1
         (242 letters)

Database: ./nr 
           95,329,361 sequences; 35,143,497,570 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010490400.1 PREDICTED: uncharacterized protein LOC104768173 [...    62   2e-07
XP_010474460.1 PREDICTED: uncharacterized protein LOC104753990 [...    55   2e-05

>XP_010490400.1 PREDICTED: uncharacterized protein LOC104768173 [Camelina sativa]
          Length = 733

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 39/206 (18%)

Query: 4   DMSNASVDFSSQLAALTAQMQENAERLRALEEENTTVRAENMLL----------QERITE 53
           DM+N     ++QL ALTA+M E  ++L  +E +N  +R EN LL            R   
Sbjct: 7   DMTNVEASVAAQLEALTAKMNETVQKLTQIEADNARLREENALLAIAVRAFTEASSRFCG 66

Query: 54  LVVSRRQSLGDNRPPPNSSEVGGPSNRPTPPHNTTASFTTSQVGTGFASAPFIAPT--HT 111
           + V+R Q L        ++         TP                    P I  T  + 
Sbjct: 67  VHVNRMQDLNSTPAATRTTTATEDGRLETPREENNGQ------------NPNIRQTRENL 114

Query: 112 FQQTLTPQQTMAAPLYSSSTIAMPTIFPMPTQPTMASNPLLFSHTGTPLEQALAKRLAEM 171
            ++  T QQ          T+ +P +  +  +P   S    +      LE  L KRL  +
Sbjct: 115 VREDNTDQQ---------RTVNIPHVTGVEHEPHTMSAEAAY------LEAMLTKRLGAV 159

Query: 172 EALITRIPGVPTPFKKSLPQSYADSP 197
           EA+I R+PGV  P +KS   SYAD+P
Sbjct: 160 EAMIGRLPGVAPPIRKSNLHSYADTP 185


>XP_010474460.1 PREDICTED: uncharacterized protein LOC104753990 [Camelina sativa]
          Length = 710

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 24/198 (12%)

Query: 4   DMSNASVDFSSQLAALTAQMQENAERLRALEEENTTVRAEN--MLLQERITELVVSRRQS 61
           D +N     + QL ALTA+M E  ++L  +E +N  +R EN  ++   R+     SR + 
Sbjct: 7   DTTNVEATVADQLEALTARMNETVQKLTQMEADNARLREENASLMTAGRVFTEASSRFR- 65

Query: 62  LGDNRPPPNSSEVGGPSNRPTPPHNTTASFTT--SQVGTGFASAPFIAPTHTFQQTLTPQ 119
            G NR    +S    P      P    A   T    V +G         T   +++LT +
Sbjct: 66  -GVNRMQDFNSM---PRTNNQTPTTDDARLETPRQDVNSGGN-----LDTRQARESLTRE 116

Query: 120 QTMAAPLYSSSTIAMPTIFPMPTQPTMASNPLLFSHTGTPLEQALAKRLAEMEALITRIP 179
                 L     +  P I  +  +P   S+   +      LE  + KRL  +EA+I R+P
Sbjct: 117 DN----LDQQGVVNTPGITGIEHEPYTKSSEAAY------LEALITKRLGAVEAMIQRLP 166

Query: 180 GVPTPFKKSLPQSYADSP 197
           GV  P +KS   SYAD+P
Sbjct: 167 GVAPPIRKSNLHSYADTP 184


Top