BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1160.1
(148 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CDY14536.1 BnaC03g49230D [Brassica napus] 72 5e-13
XP_009105597.1 PREDICTED: uncharacterized protein LOC103831468 [... 71 1e-11
XP_013669340.1 PREDICTED: uncharacterized protein LOC106373752 [... 71 1e-11
>CDY14536.1 BnaC03g49230D [Brassica napus]
Length = 170
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 21 NWK-FIWSLPTIPRVKIFIWKIYTKALSVRER-IGKYIDNNTKCPNCMNTETIEHALLHC 78
NWK +W+L P+VK F WK+ +AL V ER + ++I+ + KC C E+I H L HC
Sbjct: 6 NWKKHVWNLDCAPKVKHFSWKVLKRALPVGERLVERHINADPKCKRCGENESITHLLFHC 65
Query: 79 ALAKNVWFNFNIISE-KITSTSDWIFSWEENTNQ-CYTSEDIH----FASILWILWKVRC 132
A+ VW +++ D + SW +Q C I F ILW+LWK R
Sbjct: 66 QFAQKVWLLAPFVTDVDFRGIIDLLASWPSLCSQKCSPPTGISSGALFPWILWVLWKARN 125
Query: 133 DHCFQ 137
F+
Sbjct: 126 KFVFE 130
>XP_009105597.1 PREDICTED: uncharacterized protein LOC103831468 [Brassica rapa]
Length = 773
Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 16/160 (10%)
Query: 1 MKSMYLH-LSTNNINKNPNQQ-NW-KFIWSLPTIPRVKIFIWKIYTKALSVRER-IGKYI 56
MKS YL L ++ + PN+ +W K +W L P++K+F+WKI+ AL++ +R + + I
Sbjct: 444 MKSGYLKALESSPTSPPPNRAIDWNKGVWQLEVAPKIKLFLWKIFQGALAIGDRLVTRNI 503
Query: 57 DNNTKCPNCMNTETIEHALLHCALAKNVW----FNFNIISEKITSTSDWIFSWEENTNQ- 111
T C C N E+I H LHC +A VW F+ I S ++ D +W+ +
Sbjct: 504 STGTGCKTCNNVESINHLFLHCDIAYKVWKLAPFSSCIDSRRLL---DLNTAWQGLSKLV 560
Query: 112 CYTSEDIHFAS----ILWILWKVRCDHCFQHEINNLHKIM 147
C I ILW LW R + F ++I+ +I+
Sbjct: 561 CLPPTGISTGPLAPWILWSLWLARNNRLFNNKISTPEEIV 600
>XP_013669340.1 PREDICTED: uncharacterized protein LOC106373752 [Brassica napus]
Length = 491
Score = 70.9 bits (172), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 21 NW-KFIWSLPTIPRVKIFIWKIYTKALSVRER-IGKYIDNNTKCPNCMNTETIEHALLHC 78
NW K +W+L P+VK F WK+ +AL V ER I ++ID + KC C +E+I H L HC
Sbjct: 182 NWRKTVWNLDCAPKVKQFAWKVLKRALPVGERLIERHIDADPKCKRCGCSESITHLLFHC 241
Query: 79 ALAKNVWFNFNIISE-KITSTSDWIFSWEENTNQ-CYTSEDIHFAS----ILWILWKVRC 132
A+ VW + ++ D + +W NQ C I + I+W LWK R
Sbjct: 242 GFAQKVWLLAPLRTDMDFRGIIDLMAAWPSICNQTCLPPSGITSKALVPWIIWSLWKARN 301
Query: 133 DHCFQ 137
F+
Sbjct: 302 KFVFE 306