BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1490.1
(192 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cac... 159 5e-45
XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [... 162 9e-43
KHN13665.1 Retrovirus-related Pol polyprotein from transposon TN... 146 1e-39
>XP_007028624.1 Uncharacterized protein TCM_024518 [Theobroma cacao] EOY09126.1
Uncharacterized protein TCM_024518 [Theobroma cacao]
Length = 277
Score = 159 bits (401), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 126/190 (66%), Gaps = 8/190 (4%)
Query: 1 MLCLERDVAFLVDGETTAASVWLKLESNFMTKILTNRVYLKSKLFTCRMEEGSCIQEYVN 60
+L L +V V E +AA++W KLES ++TK LTNR+Y+K +L+T +M EG+ + +++
Sbjct: 66 LLTLSDEVLREVTDEESAAAMWFKLESIYITKSLTNRLYMKQRLYTLKMSEGTSVNTHID 125
Query: 61 KFDKIILDLKDIDVKVEDEDRALILLLSLPKSYENLVQTLIIIGDSLSMEATRNSLLADD 120
+F+++ILDLK+IDVK+EDED ALILL LP SYEN V T++ D+L+ E R L + +
Sbjct: 126 EFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRAYLNSKE 185
Query: 121 LRKVATSGMTSGGV-DKDQAQGLFATRRRSNERRKGKGGKSRGSFKKTCFSCGELGHFKA 179
L+K GG+ +++QA+GL R R E+ K GKSR KTC++CG+ GHF+
Sbjct: 186 LKKKV------GGIRNENQAEGLVVNRGRGKEKGLDKKGKSRAK-GKTCWNCGQKGHFRQ 238
Query: 180 ACPKRKLKQK 189
C K K +K
Sbjct: 239 DCTKFKDDEK 248
>XP_007038204.1 Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
EOY22705.1 Transducin/WD40 repeat-like superfamily
protein [Theobroma cacao]
Length = 1029
Score = 162 bits (409), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 126/190 (66%), Gaps = 8/190 (4%)
Query: 1 MLCLERDVAFLVDGETTAASVWLKLESNFMTKILTNRVYLKSKLFTCRMEEGSCIQEYVN 60
+L L +V V E +AA+VW KLES +MTK LTNR+Y+K +L+T +M EG+ + +++
Sbjct: 188 LLALSDEVLREVTDEESAAAVWFKLESIYMTKSLTNRLYMKQRLYTLKMSEGTSVNTHID 247
Query: 61 KFDKIILDLKDIDVKVEDEDRALILLLSLPKSYENLVQTLIIIGDSLSMEATRNSLLADD 120
+F+++ILDLK+IDVK+EDED ALILL LP SYEN V T++ D+L+ E R SL +
Sbjct: 248 EFNRVILDLKNIDVKIEDEDLALILLCYLPPSYENFVDTMLYGRDTLTFEDVRASLNFKE 307
Query: 121 LRKVATSGMTSGGV-DKDQAQGLFATRRRSNERRKGKGGKSRGSFKKTCFSCGELGHFKA 179
L+K GG+ +++QA+GL R R E+ + GKSR KTC++CG+ GHF+
Sbjct: 308 LKKKV------GGIRNENQAEGLVVNRGRGKEKGLDRKGKSRAK-GKTCWNCGQKGHFRQ 360
Query: 180 ACPKRKLKQK 189
C K K +K
Sbjct: 361 DCTKFKDDEK 370
>KHN13665.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 337
Score = 146 bits (369), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 123/194 (63%), Gaps = 9/194 (4%)
Query: 1 MLCLERDVAFLVDGETTAASVWLKLESNFMTKILTNRVYLKSKLFTCRMEEGSCIQEYVN 60
+L L +V V E +AA +WLKLES +MTK LTN++YLK +L +MEEGS I+E+V+
Sbjct: 63 ILSLGDEVLREVAEEKSAAGIWLKLESLYMTKSLTNKLYLKKRLHQLKMEEGSSIKEHVS 122
Query: 61 KFDKIILDLKDIDVKVEDEDRALILLLSLPKSYENLVQTLIIIGDSLSMEATRNSLLADD 120
F K +LDLK +DV++++ED+A++LL SLP S+ENLV T++ D+L++E + +L + +
Sbjct: 123 LFTKAVLDLKSVDVRIDEEDQAVMLLCSLPSSFENLVDTMLFGRDTLTLEEVKATLNSRE 182
Query: 121 LRKVATSGMTSGGVDKDQAQGLFATRRRSNERRKGKGGKSRGSFK--KTCFSCGELGHFK 178
L+K T GG + L A R R +R K R +K K C+ C + GHF+
Sbjct: 183 LKKKITENKGEGG----DPEALMA-RGRLEKRDSKSKNKRRSKYKNEKACYYCKKEGHFR 237
Query: 179 AACPKRKLKQKNKG 192
CP+R K+KN G
Sbjct: 238 KECPER--KKKNNG 249