BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1590.1
(173 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CAN62076.1 hypothetical protein VITISV_015538 [Vitis vinifera] 204 8e-63
KYP48154.1 Retrovirus-related Pol polyprotein from transposon TN... 196 9e-61
KYP50827.1 Retrovirus-related Pol polyprotein from transposon TN... 195 1e-60
>CAN62076.1 hypothetical protein VITISV_015538 [Vitis vinifera]
Length = 313
Score = 204 bits (520), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 95/171 (55%), Positives = 124/171 (72%)
Query: 2 DYGLHFKGDPAILEGYSDASWNSIETKSKSTTGWIFTLGGAAVSWGSKKQTIISDSTMLS 61
DYGLH+ PA+LEGYSDA+W S SKS +G++FTLGGAA SW S KQT+I+ STM S
Sbjct: 143 DYGLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGGAAXSWKSSKQTVIARSTMES 202
Query: 62 ELIALADASKEAEWLRNLLEEIPIWKKPSPSVMINCDNQATLYNVANKTYNGKSRHVSLR 121
E IAL +EAEWLR+ LE+IP W KP P + I+CD+Q+ + + YNGKSRH+ R
Sbjct: 203 EFIALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSAIGRAXSNMYNGKSRHIRRR 262
Query: 122 HQFVRQLLKRGVITVDYVETKKNLADPLTKGLPKVMVSVKNKEMGLRSVNE 172
H +RQLL GVI+VDYV++K N+ADPLTKGL + +V ++ MGL+ + E
Sbjct: 263 HNTIRQLLSTGVISVDYVKSKDNIADPLTKGLNRELVEKSSRGMGLKPIKE 313
>KYP48154.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 223
Score = 196 bits (498), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 127/170 (74%)
Query: 1 MDYGLHFKGDPAILEGYSDASWNSIETKSKSTTGWIFTLGGAAVSWGSKKQTIISDSTML 60
MDYG+ + G PA+LEGYSDA+W S ++KST+G++FTLGG A++ S +Q+II+ STM
Sbjct: 49 MDYGIEYSGFPAVLEGYSDANWISDLDETKSTSGYVFTLGGGAIASRSVRQSIIARSTME 108
Query: 61 SELIALADASKEAEWLRNLLEEIPIWKKPSPSVMINCDNQATLYNVANKTYNGKSRHVSL 120
SE +AL S EAEWLRN L IP+ KP+PSV I+CDNQ+ + NK+YNGK+RH+ L
Sbjct: 109 SEFVALEMTSTEAEWLRNFLANIPLGMKPTPSVSIHCDNQSAIAIAKNKSYNGKNRHIQL 168
Query: 121 RHQFVRQLLKRGVITVDYVETKKNLADPLTKGLPKVMVSVKNKEMGLRSV 170
RH V+QLLK G I+++YV+++ NLADPLTK L + M+ ++ MGL+ +
Sbjct: 169 RHNIVKQLLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKPI 218
>KYP50827.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 188
Score = 195 bits (495), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 126/170 (74%)
Query: 1 MDYGLHFKGDPAILEGYSDASWNSIETKSKSTTGWIFTLGGAAVSWGSKKQTIISDSTML 60
MDYG+ + G PA+LEGYS+A+W S +++ST+G++FTLGG A+SW S +Q+II+ STM
Sbjct: 8 MDYGIEYSGFPAVLEGYSNANWISDSDETESTSGYVFTLGGGAISWRSVRQSIIARSTME 67
Query: 61 SELIALADASKEAEWLRNLLEEIPIWKKPSPSVMINCDNQATLYNVANKTYNGKSRHVSL 120
SE +AL S E EWLRN L IP+ KP+PS+ I+CDN + + NK+YNGK+RH+ L
Sbjct: 68 SEFVALEMTSTETEWLRNFLANIPLGMKPTPSMSIHCDNHSAIAIAKNKSYNGKNRHIQL 127
Query: 121 RHQFVRQLLKRGVITVDYVETKKNLADPLTKGLPKVMVSVKNKEMGLRSV 170
RH V+QLLK G I+++YV+++ NLADPLTK L + M+ ++ MGL+ +
Sbjct: 128 RHNIVKQLLKDGTISINYVKSEGNLADPLTKPLGRKMIYETSRGMGLKPI 177