BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1740.1
(86 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010255537.1 PREDICTED: RING-H2 finger protein ATL39-like [Nel... 136 7e-39
XP_004306846.1 PREDICTED: RING-H2 finger protein ATL7-like [Frag... 134 3e-38
XP_008338187.1 PREDICTED: RING-H2 finger protein ATL7-like [Malu... 133 5e-38
>XP_010255537.1 PREDICTED: RING-H2 finger protein ATL39-like [Nelumbo nucifera]
Length = 203
Score = 136 bits (342), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 76/86 (88%)
Query: 1 MLGSGMNLVTTVIGFGMSSTFIVFICTRLICGRLRPAEARPVFEIDSRTDLEESEHRITG 60
ML SGMNL+TTVIGFGMS+TFIVF+CTRLICGR+R E+RPVFE+DSR D+E+ EHR +G
Sbjct: 1 MLASGMNLITTVIGFGMSATFIVFVCTRLICGRIRTVESRPVFEMDSRADVEQPEHRTSG 60
Query: 61 LERVVVASIPSVKYNREAFQYEEDAQ 86
LE VVVA+IP++K++REAF EDAQ
Sbjct: 61 LEPVVVAAIPTMKFSREAFSSIEDAQ 86
>XP_004306846.1 PREDICTED: RING-H2 finger protein ATL7-like [Fragaria vesca
subsp. vesca]
Length = 203
Score = 134 bits (338), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 78/86 (90%)
Query: 1 MLGSGMNLVTTVIGFGMSSTFIVFICTRLICGRLRPAEARPVFEIDSRTDLEESEHRITG 60
M+GSGMNL+TTVIGFGMS+TFI+F+CTR+ICGRLR E+RP+FE++SRTDLE+ E+R G
Sbjct: 1 MMGSGMNLITTVIGFGMSATFIIFVCTRIICGRLRGVESRPMFEVESRTDLEQPENRSNG 60
Query: 61 LERVVVASIPSVKYNREAFQYEEDAQ 86
LE+VVVA+IP++KY++EAF EDAQ
Sbjct: 61 LEQVVVAAIPTMKYDQEAFSSVEDAQ 86
>XP_008338187.1 PREDICTED: RING-H2 finger protein ATL7-like [Malus domestica]
Length = 180
Score = 133 bits (335), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 79/86 (91%)
Query: 1 MLGSGMNLVTTVIGFGMSSTFIVFICTRLICGRLRPAEARPVFEIDSRTDLEESEHRITG 60
M+GSGMNL+TTVIGFGMS+TFIVF+CTR+ICGRLR +E+RP+FEI+SR DL++ EH+ +G
Sbjct: 1 MMGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRGSESRPMFEIESRVDLDQPEHQASG 60
Query: 61 LERVVVASIPSVKYNREAFQYEEDAQ 86
LE+VVV++IP++KY+++AF EDAQ
Sbjct: 61 LEQVVVSAIPTMKYDQKAFSSLEDAQ 86