BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000108.1_g1800.1
(275 letters)
Database: ./nr
95,329,361 sequences; 35,143,497,570 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010278528.1 PREDICTED: traB domain-containing protein isoform... 387 e-132
XP_011470406.1 PREDICTED: traB domain-containing protein isoform... 374 e-128
XP_010278526.1 PREDICTED: traB domain-containing protein isoform... 378 e-128
>XP_010278528.1 PREDICTED: traB domain-containing protein isoform X3 [Nelumbo
nucifera]
Length = 404
Score = 387 bits (995), Expect = e-132, Method: Compositional matrix adjust.
Identities = 200/273 (73%), Positives = 230/273 (84%), Gaps = 7/273 (2%)
Query: 8 LYITLSTVHTNSLTSIPTESTFRAGIMYISNEGEPMSNMKSNMFSLSGSGFFGAIG---- 63
+ + L LTSI E FRAGIMY SNE EP + ++SNMFSLSG+GFFGA+G
Sbjct: 133 VVVELCRSRQERLTSIVAELIFRAGIMYTSNEDEPSTQLRSNMFSLSGAGFFGAVGRSIN 192
Query: 64 --GQTALALRLLLAVFSSKLSSNANQPFGNEFRAARKASEEIGAQLVLGDRPIEITLERA 121
GQTALALRLLL VFSSK+SS ++PFG+EFR+AR+ASEE+GAQLVLGDRPIEITLERA
Sbjct: 193 LGGQTALALRLLLXVFSSKISSKVDRPFGDEFRSARRASEEVGAQLVLGDRPIEITLERA 252
Query: 122 WNSLGWNEKLSLVTAVLRGITSPLSATTESNLKDSDKQDSPFQLYEQLSYSYPSLLQPLI 181
WNSL NEKLSLVT+VLRGITSP S + + LK S+ D PFQLYEQLS+SYPSLLQPLI
Sbjct: 253 WNSLKLNEKLSLVTSVLRGITSP-SEISGNKLKGSETDDGPFQLYEQLSFSYPSLLQPLI 311
Query: 182 HERDTYLAWSLKRSKAVNNCKRVVGVIGKGHMNGVIYALITDLGDLRFRDLVGKRKFGES 241
HERDTYLAWSLKRSKAVN+ KRVVGVIGKGHMNGVIYAL++DLGDLRFRDLVGKR+ G S
Sbjct: 312 HERDTYLAWSLKRSKAVNSSKRVVGVIGKGHMNGVIYALVSDLGDLRFRDLVGKRQPGSS 371
Query: 242 SNGWIENLLKNLVRDTVIGILVWALYEQLKTGL 274
+NGW+ L K+L+RDT+IGIL+WAL+EQLKTGL
Sbjct: 372 NNGWLNTLFKSLIRDTIIGILLWALFEQLKTGL 404
>XP_011470406.1 PREDICTED: traB domain-containing protein isoform X2 [Fragaria
vesca subsp. vesca]
Length = 270
Score = 374 bits (960), Expect = e-128, Method: Compositional matrix adjust.
Identities = 190/264 (71%), Positives = 215/264 (81%), Gaps = 12/264 (4%)
Query: 23 IPTESTFRAGIMYISNEGEPMSNMKSNMFSLSGSGFFGAIG------GQTALALRLLLAV 76
+ E FRAGIMY S + E +KSNMFSLSG+GFFGA+G GQTALALR+LLAV
Sbjct: 7 VEAEPIFRAGIMYASMDDESGQQLKSNMFSLSGNGFFGAVGRSINLGGQTALALRVLLAV 66
Query: 77 FSSKLSSNANQPFGNEFRAARKASEEIGAQLVLGDRPIEITLERAWNSLGWNEKLSLVTA 136
FSSK+SSN N+PFG+EFRAARKASEE+GAQ+VLGDRPIEITLERAWNSL W EKLSLVT+
Sbjct: 67 FSSKISSNINRPFGDEFRAARKASEEVGAQIVLGDRPIEITLERAWNSLTWTEKLSLVTS 126
Query: 137 VLRGITSPLSATTESNLKDSDKQDSPFQLYEQLSYSYPSLLQPLIHERDTYLAWSLKRSK 196
V RGITS S ++ +LK+S DS FQLYEQLS SYPSLLQPLIHERDTYLAWSLKRSK
Sbjct: 127 VFRGITSS-SDMSQMSLKESSTSDSTFQLYEQLSSSYPSLLQPLIHERDTYLAWSLKRSK 185
Query: 197 AVNNCKRVVGVIGKGHMNGVIYALITDLGDLRFRDLVGKRKFGES-----SNGWIENLLK 251
AVN KRVVGVIGKGHMNGVIYAL+ D GDLRFRDLVG ++ S SNGW+ LLK
Sbjct: 186 AVNKSKRVVGVIGKGHMNGVIYALLADSGDLRFRDLVGGQRPSWSSNDAASNGWVVKLLK 245
Query: 252 NLVRDTVIGILVWALYEQLKTGLI 275
+LVRDT+IGI++WA YEQ+K G I
Sbjct: 246 DLVRDTIIGIVLWAFYEQIKGGFI 269
>XP_010278526.1 PREDICTED: traB domain-containing protein isoform X1 [Nelumbo
nucifera]
Length = 390
Score = 378 bits (970), Expect = e-128, Method: Compositional matrix adjust.
Identities = 193/251 (76%), Positives = 221/251 (88%), Gaps = 7/251 (2%)
Query: 30 RAGIMYISNEGEPMSNMKSNMFSLSGSGFFGAIG------GQTALALRLLLAVFSSKLSS 83
RAGIMY SNE EP + ++SNMFSLSG+GFFGA+G GQTALALRLLL VFSSK+SS
Sbjct: 141 RAGIMYTSNEDEPSTQLRSNMFSLSGAGFFGAVGRSINLGGQTALALRLLLXVFSSKISS 200
Query: 84 NANQPFGNEFRAARKASEEIGAQLVLGDRPIEITLERAWNSLGWNEKLSLVTAVLRGITS 143
++PFG+EFR+AR+ASEE+GAQLVLGDRPIEITLERAWNSL NEKLSLVT+VLRGITS
Sbjct: 201 KVDRPFGDEFRSARRASEEVGAQLVLGDRPIEITLERAWNSLKLNEKLSLVTSVLRGITS 260
Query: 144 PLSATTESNLKDSDKQDSPFQLYEQLSYSYPSLLQPLIHERDTYLAWSLKRSKAVNNCKR 203
P S + + LK S+ D PFQLYEQLS+SYPSLLQPLIHERDTYLAWSLKRSKAVN+ KR
Sbjct: 261 P-SEISGNKLKGSETDDGPFQLYEQLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNSSKR 319
Query: 204 VVGVIGKGHMNGVIYALITDLGDLRFRDLVGKRKFGESSNGWIENLLKNLVRDTVIGILV 263
VVGVIGKGHMNGVIYAL++DLGDLRFRDLVGKR+ G S+NGW+ L K+L+RDT+IGIL+
Sbjct: 320 VVGVIGKGHMNGVIYALVSDLGDLRFRDLVGKRQPGSSNNGWLNTLFKSLIRDTIIGILL 379
Query: 264 WALYEQLKTGL 274
WAL+EQLKTGL
Sbjct: 380 WALFEQLKTGL 390